Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01317 ATGGCTGTACAACCAGAGGTAGAGCATCCCAAAAAAGCTTTCGGATGGGCAGCTAGGGACACTTCTGGAGTCCTTTCTCCTTTCCAATTCTCTAGAAGagAAACCGGCGAAAAGGATGTGGCATTCAAAGTACTATATTGTGGTATATGTCACTCAGATCTTCACATGGTGAAGAATGAGTGGGGCAATAGTATTTATCCATTAGTTCCCGGACATGAAGTTGCTGGTGAAGTGACTGAGGTAGGAAGTAAGGTAACAAAGTTCAAAGTTGGAGACAGGGTAGGTGTAGGGTGCATGGTTGGATCATGTCACTCATGTCAAAGTTGTGGTGACGATCTCGAGAATTACTGTCCGAAGGTGATTCTCACATATAGCGTAAAAAATATCGACGGAACAATCACATATGGAGGCTACTCTGACACCATGGTTTGCGAGGAACACTTTGTGATCCGTATTCCTGATGCCTTATCACTTGAGGCCGCTGCTCCTCTTCTTTGTGCCGGGATCACAGTGTATAGCCCTTTGAAATATTTTGGACTCGACAAACCTGGTTTGCATATAGGTGTGGTTGGTCTCGGTGGATTAGGTCATATGGCTGTGAAATTCGCCAAAGCTTTTGGTGCTAATGTAACGGTGATAAGCACTTCTCCTAATAAAAAGAAGGAAGCTATTGAACACTTGGGAGCTGACTCATTCGTGGTTAGCCGCGAACAAGATCAGATGCAGGCTTTAATGGGGACTTTTGATGGTATCATTGACACTGTTTCAGCACAACATCCACTAGTGCCATTGCTTGCTCTAGTGAAGAATCATGGTAAATTTGTTATGGTTGGAGCACCAGAGAAGCCTTTAGAAGTTCCAGCATTTTCTATAATTGCAGGGAGAAAAACAATTAGTGGGAGTATGATTGGAGGAATAAAGGAAACACAAGAAATGATTGATTTTGCTGCCAAACATTGTGTGAAACCTGATATTGAGATTATTGCAGTAGATTATGTGAATACTGCAATGGAGCGTTTACTCAAAGCTGATGTCAAATATCGATTTGTTATTGACATTGGAAACACATTGAAGGCAAGTTCTTAA 1086 0.4208 MAVQPEVEHPKKAFGWAARDTSGVLSPFQFSRRETGEKDVAFKVLYCGICHSDLHMVKNEWGNSIYPLVPGHEVAGEVTEVGSKVTKFKVGDRVGVGCMVGSCHSCQSCGDDLENYCPKVILTYSVKNIDGTITYGGYSDTMVCEEHFVIRIPDALSLEAAAPLLCAGITVYSPLKYFGLDKPGLHIGVVGLGGLGHMAVKFAKAFGANVTVISTSPNKKKEAIEHLGADSFVVSREQDQMQALMGTFDGIIDTVSAQHPLVPLLALVKNHGKFVMVGAPEKPLEVPAFSIIAGRKTISGSMIGGIKETQEMIDFAAKHCVKPDIEIIAVDYVNTAMERLLKADVKYRFVIDIGNTLKASS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01317 361 Gene3D - 16 353 - -
Tsu05g01317 361 Gene3D - 167 323 - -
Tsu05g01317 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Tsu05g01317 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Tsu05g01317 361 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 360 - -
Tsu05g01317 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Tsu05g01317 361 CDD CAD1 14 352 - -
Tsu05g01317 361 SUPERFAMILY GroES-like 20 184 IPR011032 -
Tsu05g01317 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Tsu05g01317 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Tsu05g01317 361 PANTHER ALDEHYDE REDUCTASE 1 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01317 Tsu-Chr5 11969722 11971524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01317 11 360 Monolignol Biosynthesis Gene Families AT4G37990 72.857 2.88e-175 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01317 - K23232 gmx:100809071 608.986