Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01315 ATGGCTCTCTCCAACTTAAAATCTAATAGAACAACTCTTTCTTCGCAACTCATTAAAATCTTCATTGCATTCCTCTTCCTTCAATACCACAATGTCAATTCACAATATTCACCATCACCATCGCAAGAATTGGCACGAACAGAAACATTTTCTTTCACCGTAAGACAATTCGATGAAGAAAATCCCAATATATTTCTTGGTGGAGGCGCCTCAACCACCGGTGGCATTCTAAAACTAACAAAAGCCGACCAAAATGGTAAACCACTCCAAAATAGTGTTGGACGCGCAACATATTTCACACTGATTCACATTTGGGATAAAGCCAGTGGAGAACTAGCAGATTTCTCCGTTGGTTTCTCCTTTGTCGTGAACACAAACGGTTCAAGACTCCATGGAGATGGATTTACTTTCTTCATAGGACCAGTTCATTTTGAGATACCAAAAAATTCAAGTGGCGGGTATCTTGGTCTTTTTAACCCAGAAACTGCACATATTCCAGCTCAAAATCCAATAATAGCAATTGAGTTTGATAGTTTTACAAATGGATGGGATCCTGCTACACCATCTCAATTTCCTCACATTGGAATTGATGTTGGTTCTATTGATTCGGTTGCAACTGGGAATTGGCCAATTGATTTTGTGCAAGCAAATCCTTTAGGAGAAGCtagtataaattataattcTGAGTCTAAAAAATTGAGTGTGTTTGTGGCTTACCCTGGGAGTGAGAGGGAGGGAACTAGTGTCTCGTGTGTTGTTGATTTGAGGAGTGTTTTGCCTGAATGGGTTAGAGTTGGTTTCACTGCTTCTACAGGAGAGTTAGTTGAAACACACGATATTATCAATTGGTCATTTGAATCAGCTTTGTAA 870 0.3897 MALSNLKSNRTTLSSQLIKIFIAFLFLQYHNVNSQYSPSPSQELARTETFSFTVRQFDEENPNIFLGGGASTTGGILKLTKADQNGKPLQNSVGRATYFTLIHIWDKASGELADFSVGFSFVVNTNGSRLHGDGFTFFIGPVHFEIPKNSSGGYLGLFNPETAHIPAQNPIIAIEFDSFTNGWDPATPSQFPHIGIDVGSIDSVATGNWPIDFVQANPLGEASINYNSESKKLSVFVAYPGSEREGTSVSCVVDLRSVLPEWVRVGFTASTGELVETHDIINWSFESAL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01315 289 PIRSF Plant_L_lectin 19 289 IPR016363 GO:0030246
Tsu05g01315 289 SUPERFAMILY Concanavalin A-like lectins/glucanases 49 288 IPR013320 -
Tsu05g01315 289 CDD lectin_legume_LecRK_Arcelin_ConA 50 289 IPR001220 GO:0030246
Tsu05g01315 289 ProSitePatterns Legume lectins alpha-chain signature. 259 268 IPR000985 -
Tsu05g01315 289 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 289 - -
Tsu05g01315 289 Pfam Legume lectin domain 51 287 IPR001220 GO:0030246
Tsu05g01315 289 PANTHER LECTIN 1 289 - -
Tsu05g01315 289 Gene3D - 47 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01315 Tsu-Chr5 11940985 11941854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01315 49 289 Receptor kinase-like Gene Family AT5G10530 32.927 1.67e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01315 - - gmx:100780546 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01315 05 11940985 11941854 Tsu04g03001 04 37027185 37029122 PCT
Tsu04g03000 04 37025474 37026265 Tsu05g01315 05 11940985 11941854 PCT