Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01314 ATGGTTTTTTCTAACTCTAAATTTAACACCGTTCAATCTCGAGTCCTTTCTTTACCAATCTTCATTACTTTCCTCTTACTACAATACCACAATGTCGAGTCACAAACACCACTAACACGATCAGAAAACGTTGCTTTCAGCATAACACAATTCGAGGAAGAAAATACTGACATTTTTACAAGGGGTGATGCCACAATCTCGAGAGGCATTCTAAGACTAACAAAAACTGACCAATATGGTAAACCACTCCCTAATAGTGTTGGACGTGCAACATATGTCACGCCGATTCACATTTGGGATAAAGCTAGTGGAAAACTAGCAGATTTCTCCACTGGTTTCTCCTTTATCGTGAACACAAACGATGAACCACTTCATGGAGATGGATTTGCTTTTTTTATAGGACCAATTCATTTTGACTTACCAAAAAATTCAAGTGGAGGGTATCTTGGTCTTTTCAACCCTGAAACTGCACATGTTCCATCCAAAAATCCTATAGTAGCTATTGAGTTTGATGGTTTTACAAATGTGTGGGACCCTCCTTCATCGTATCAGTCTCCTCACATTGGAATTGATGTTGGATCTATTGACTCAGTTGCATATACACAATGGCCTAttaattttgtgcaaaaaaaccCTATAGGAGAAGCTAGTATAAACTACAACTCTGAGTCTAAAAGCTTGAGTGTGTTTGTGGCTTATCCAGGGACTGAATGGAATTCAACTAGTGTctcatttgttgttgatttaaggAGTGTTCTACCTGAATGGGTTAGAGTTGGGTTCTCTGCTGCAACGGGACAATTGGTCGAAACACATGAAATCATTAATTGGTCTTTTGAATCATCTTTGTAA 852 0.3685 MVFSNSKFNTVQSRVLSLPIFITFLLLQYHNVESQTPLTRSENVAFSITQFEEENTDIFTRGDATISRGILRLTKTDQYGKPLPNSVGRATYVTPIHIWDKASGKLADFSTGFSFIVNTNDEPLHGDGFAFFIGPIHFDLPKNSSGGYLGLFNPETAHVPSKNPIVAIEFDGFTNVWDPPSSYQSPHIGIDVGSIDSVAYTQWPINFVQKNPIGEASINYNSESKSLSVFVAYPGTEWNSTSVSFVVDLRSVLPEWVRVGFSAATGQLVETHEIINWSFESSL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01314 283 ProSitePatterns Legume lectins alpha-chain signature. 253 262 IPR000985 -
Tsu05g01314 283 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 283 - -
Tsu05g01314 283 PIRSF Plant_L_lectin 13 283 IPR016363 GO:0030246
Tsu05g01314 283 Pfam Legume lectin domain 44 282 IPR001220 GO:0030246
Tsu05g01314 283 Gene3D - 41 283 - -
Tsu05g01314 283 SUPERFAMILY Concanavalin A-like lectins/glucanases 44 283 IPR013320 -
Tsu05g01314 283 CDD lectin_legume_LecRK_Arcelin_ConA 46 283 IPR001220 GO:0030246
Tsu05g01314 283 PANTHER LECTIN 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01314 Tsu-Chr5 11937465 11938316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01314 43 283 Receptor kinase-like Gene Family AT5G10530 38.866 3.05e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01314 - - gmx:100780546 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01314 05 11937465 11938316 Tsu04g03000 04 37025474 37026265 PCT
Tsu04g02999 04 37022148 37022939 Tsu05g01314 05 11937465 11938316 PCT