Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01261 ATGTATTGTTTGGATTGTATGAATGGTCCTCTTTGTTCTCTCTGTCTTGCTTATCATAAAGATCACCGTTTTATTCAgATTAGGAGGTCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAGGTGTTGGACATAACTGGTGTTCAAACATACATTATCAATAGTGCAAGAGTTGTGTTTTTGAATGAAAGGCCTCAACCTAGGCCAGGAAAAGGTGTTACAAACACTTGTGAAGTTTGTGAGAGAAGCCTTCTTGATTCTTTTCGGTTCTGTTCTCTTGGTTGCAAGATTGTAGGAACATCTAAGAATTTCCAGAAGACAAAGAAACAATTAGCAGTAATGGCATCAGATTCTGAGGATTCATACAGCAGCAACAACATTCATAGCCGTCAGAAGAAAATCAAAGTTCAAAGCTTTTCACCATCTACACCACCACCAACTTCAGTTAATTACAAAACAGCCAAAAGAAGAAAGGGAATTCCACATAGAGCCCCATTAGGGGTATTTTTAGATAATTGGTATTTTTAA 534 0.3708 MYCLDCMNGPLCSLCLAYHKDHRFIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFQKTKKQLAVMASDSEDSYSSNNIHSRQKKIKVQSFSPSTPPPTSVNYKTAKRRKGIPHRAPLGVFLDNWYF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01261 177 MobiDBLite consensus disorder prediction 124 154 - -
Tsu05g01261 177 Pfam PLATZ transcription factor 28 99 IPR006734 -
Tsu05g01261 177 MobiDBLite consensus disorder prediction 124 152 - -
Tsu05g01261 177 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 170 - -
Tsu05g01261 177 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01261 Tsu-Chr5 11391817 11394256 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tsu05g01261 PLATZ 2.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01261 - - gmx:100791221 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01261 05 11391817 11394256 Tsu05g01261 05 11391817 11394256 ECH
Tsu05g01261 05 11391817 11394256 Tsu04g02954 04 35979667 35982464 PCT