Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01207 ATGACGGCAACAACAAATgcagaagaacaagaagcatcACCACCACACTTACAAGGAATCTCAGACTTAGTTACCTCTCTTAATATCCTATCCTCCCCTGATTTCTACGCCGTTCTCGACGTCGAACCCACCGCCTCAATCACCACCATTCATAAACAGTTCAAAAAACTCTCTTCACTTCTTCACCCAAACAATAATCACCGCCACATTGCATCTTCTCAAGAAGCCCTTAAACTTGTTACTGACGCTTTTGGCATTTTATCTGATAGAAAGCTTAGAGAAGATTACGACGGGAAGCTTGATCTTGAGATGAGAGGAAAGGTAAGAACTTTTTGGACTGCTTGTGATACTTGTAGGGTTTTGCATCAATTTGAGAGAAAGTATTTGGGTCATAAACTTGTTTGTCCTGGTTGTGATAAGAGTTTTAAGGCTGTTGAAGCTGTTCAGAGTGATGGGTCTGAGGAAGAAGCTGCTCAGAGTGATGGGTCTGATGAAGAAGTTGTTCAGAGTGATGGGtctgaggaagatgaagaagataagACTTTGGGTGATTTTATgttgaagaggaagaacattaagaagaagaagaatgggaAAATGGGTTGTGAAAAAGATGAGATTTTTAAGGGTAATGATGAAATGGGTGATGGAAAAGATGAGAGCTTTGAGGGTAATGATGAAATGGGTGGTGAAAAAGGTGAGAGCTTTAAGGGTAATGATGAAGTGGGTATTGTTGGGAGATTGAGGAAGAGAACTCGTTCGGTTGGGGAGGTTTTGGAATGTTCTGATTCCAAGAGGGTTGTTGGAAGTGAAGAGGAAACAATGACATTGGCTGAATTTCAATCTAAAGTGAAGACTAAGAAAAAGGATCAGAAAGGGAAGATGAAGGGGTTGGAGATTAAGAAGGGTTTTGCGGTTGAGGAGGAGAAGAATGAGGGTTCGGTGAAGAGAAATGGGTTGCGTCTTGAGAGGCATAGGGATACTAGTGGAGAGGAATTAGAAGCTATGGCGGTTGTGGATTcggatttttatgattttgataAAGATAGAGTGGAGAGGAGGTTTAAGAAAGGTCAAGTTTGGGCTGTGTATGATGACGATGATGGAATGCCGAGGAGTTATGCTTTGATTGATGAAACTGTTTCGGTGAATCcttttaaagtgatgataagTTGGTTGGATTTACAGAAGAATGGGGATGGAATGATTGTTAGTAGGGAGAAATTAGGGTTTCATATACCTTGTGGGAGATTTAAAGTTGCTAAGAAGGCTTCCATAACTTCTGTAAATGTGTTCTCTCATGTTGTGGATTGTGATCGGGCAGCGCGTGAGGTTTACAAAGTTTATCCTAAGAAGGGCTCGGTTTGGGCGCTCTATAGTGAGGCGAGTCTTGATGCCGGTGAGGGGAATGGATGCTATGATATTGTTGTGTTTTTGACAAGTTACAGTGAGATGAATGGAATGAGCATGGCATTTCTCGAGAAGGTTGATGGTTATAAGACGGTGTTTAAGAGACAAGAGAGTGGGAGTCACGCTGTTAGATTTCTTGGTAAGGATGAATTTGGGCTAATTTCTCATCAGATTCCTGCGAGAAAATTTCCTTGTGACGAGGCTCCTGAATTGTTGAAAGACTGTTGGGAGCTTGATCCGGCTTCACTTCCTTCGGATTTACTTACTATTGGTGGCATAGATAATTGA 1698 0.391 MTATTNAEEQEASPPHLQGISDLVTSLNILSSPDFYAVLDVEPTASITTIHKQFKKLSSLLHPNNNHRHIASSQEALKLVTDAFGILSDRKLREDYDGKLDLEMRGKVRTFWTACDTCRVLHQFERKYLGHKLVCPGCDKSFKAVEAVQSDGSEEEAAQSDGSDEEVVQSDGSEEDEEDKTLGDFMLKRKNIKKKKNGKMGCEKDEIFKGNDEMGDGKDESFEGNDEMGGEKGESFKGNDEVGIVGRLRKRTRSVGEVLECSDSKRVVGSEEETMTLAEFQSKVKTKKKDQKGKMKGLEIKKGFAVEEEKNEGSVKRNGLRLERHRDTSGEELEAMAVVDSDFYDFDKDRVERRFKKGQVWAVYDDDDGMPRSYALIDETVSVNPFKVMISWLDLQKNGDGMIVSREKLGFHIPCGRFKVAKKASITSVNVFSHVVDCDRAAREVYKVYPKKGSVWALYSEASLDAGEGNGCYDIVVFLTSYSEMNGMSMAFLEKVDGYKTVFKRQESGSHAVRFLGKDEFGLISHQIPARKFPCDEAPELLKDCWELDPASLPSDLLTIGGIDN 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01207 565 SUPERFAMILY Chaperone J-domain 26 99 IPR036869 -
Tsu05g01207 565 MobiDBLite consensus disorder prediction 149 184 - -
Tsu05g01207 565 Gene3D DnaJ domain 26 114 IPR036869 -
Tsu05g01207 565 ProSiteProfiles dnaJ domain profile. 34 100 IPR001623 -
Tsu05g01207 565 MobiDBLite consensus disorder prediction 157 180 - -
Tsu05g01207 565 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 3 561 - -
Tsu05g01207 565 CDD DnaJ 34 89 IPR001623 -
Tsu05g01207 565 PANTHER BNAC03G44070D PROTEIN 3 561 - -
Tsu05g01207 565 Pfam Domain of unknown function (DUF3444) 335 533 IPR024593 -
Tsu05g01207 565 SMART dnaj_3 33 92 IPR001623 -
Tsu05g01207 565 Pfam DnaJ domain 34 97 IPR001623 -
Tsu05g01207 565 MobiDBLite consensus disorder prediction 206 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01207 Tsu-Chr5 10741354 10743559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01207 7 149 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.902 2.80e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01207 - - cam:101509254 640.958