Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01157 atggcagATAGTTCAGTATCATTTTTATTGGACAAACTGTCTTCATTACTTCAAGAAGAAGTGAACCTACAAAAAGGGGTCCGTGAAGATGTTCAATACATCAAAGATGAACTTGAACGCCACAAAGCCATCTTAATGGTAGCTGATTCATTGGAACACAAAGACCCTGAACTCCAAGTATGGGTTAAAAGTGTAAGAAATATTGCTCAAGACATGGAAGATGCTATAGATGAATACAATCTTCGTCTTGTtgatcatcatcaacaaagTCAGAGCAATTTTTCTATTCATAAGATTGCTTTTGGGATCAAGACTATGAAAGCTAGACACAGAATAGCTACAGATATACAAGGAATCAAATCCAAAGTTGAAACTATCTCCAATGGACGTCCAAACATAACTGGTGTAGGTTCAAGCTCAAGTCAAAGGCGTTCATCAAGGCTTGATAGTCAAGGTGATGCCCTTTTGCTAGAGGAAGCTGATTTAGTTGGAATTGAAGAACCAAAGAAGCAGCTTTGTGATTTGCTTTTCAAAGATGAAACAAATAGAGCAGTGATTTCAATCTATGGTATGGGAGGTTTAGGGAAGACAACATTGGCAAAACAAGTCTATGAAGATCCAAAAGTAAAGAAATATTTCAGGATTCATGCTTGGGTTAATCTCTCTCAATCGTTCAGAATGGAAGAGGTACTGAAAGACCTTGTGCAACAACTCCATAATGTTATTGGAAAACCAGCTCCAGAATCAATTGGAATGATGaaaattgagaatttgaaaGAGTTTATCAAGAATTTTCTTCAGAGAAGTAAGAAGTATCTAATTGTGCTTGATGATGTGTGGCATGTGAATGTATGGGATGCTGTGAAGCTTGCTTTGCCTAATAACAACTGCGGCAGTAGAGTGATTCTTACGACGCGCAAGAAAGATATAGCTTTGTATTCTTGTGCAGAACTGGGTAAGGATTTTCACCTTGAATTCTTACCTAAGCAAGAAGCTTGGTCTCTTTTTTGTAGGAAGACATTTCAAGGTAACTCATGTCCTCCTCATCTTGAAGAAGTTTGTAGGAAGATCTTGAAATTGTGTGGAGGGTTGCCATTAGCAATTGTGGCAATCAGTGGTGCTTTGGCTACAAAAGAAAGATCAAACATAGAAGAGTGGAACATGGTTTGCAGAAGTTTTGGTTCAGAAATTGAAGGCAATGACATATTGGAAGTTATGAAGAAAAAGTGTATCCTTGTGTTGTT 1244 0.365 MADSSVSFLLDKLSSLLQEEVNLQKGVREDVQYIKDELERHKAILMVADSLEHKDPELQVWVKSVRNIAQDMEDAIDEYNLRLVDHHQQSQSNFSIHKIAFGIKTMKARHRIATDIQGIKSKVETISNGRPNITGVGSSSSQRRSSRLDSQGDALLLEEADLVGIEEPKKQLCDLLFKDETNRAVISIYGMGGLGKTTLAKQVYEDPKVKKYFRIHAWVNLSQSFRMEEVLKDLVQQLHNVIGKPAPESIGMMKIENLKEFIKNFLQRSKKYLIVLDDVWHVNVWDAVKLALPNNNCGSRVILTTRKKDIALYSCAELGKDFHLEFLPKQEAWSLFCRKTFQGNSCPPHLEEVCRKILKLCGGLPLAIVAISGALATKERSNIEEWNMVCRSFGSEIEGNDILEVMKKKCILVL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01157 414 Gene3D - 327 409 IPR042197 -
Tsu05g01157 414 Pfam Rx N-terminal domain 6 94 IPR041118 -
Tsu05g01157 414 PANTHER DISEASE RESISTANCE PROTEIN RP 38 401 IPR044974 GO:0006952
Tsu05g01157 414 Coils Coil 62 89 - -
Tsu05g01157 414 CDD RX-CC_like 2 128 IPR038005 -
Tsu05g01157 414 PANTHER NB-ARC DOMAIN CONTAINING PROTEIN, EXPRESSED 38 401 - -
Tsu05g01157 414 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 407 IPR027417 -
Tsu05g01157 414 Pfam NB-ARC domain 166 399 IPR002182 GO:0043531
Tsu05g01157 414 Gene3D - 5 113 - -
Tsu05g01157 414 Gene3D - 150 316 IPR027417 -
Tsu05g01157 414 PRINTS Disease resistance protein signature 185 200 - -
Tsu05g01157 414 PRINTS Disease resistance protein signature 361 375 - -
Tsu05g01157 414 PRINTS Disease resistance protein signature 266 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01157 Tsu-Chr5 10192694 10228214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01157 186 380 WRKY Transcription Factor Family AT5G45050 26.531 4.02e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01157 K13457 - gmx:100305458 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01157 05 10192694 10228214 Tsu05g01157 05 10192694 10228214 ECH