Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01156 ATGGCAGATAGTTCAGTGTCATTTTTAGTGGACAAACTGTCTTCGTTACTTAAAGAAGAAGTGAACCTTGAAAAAGGGGTTCTTAAAGATGTTGAATACATCAAAGATGAACTTAAACACTACAAAGCCATCTTAATGGAAGTTGATTCATTGGAACACAAAGACCTTGAACTCAAAGATTGGGTTCAAAGTGTTAGAAAAATTACTGAAGACATGGAAGATGCTATAGATGAATACAATCTTTGTCTTGTtgatcatcatcaacaaagTAAGAACAATGTTATTCATAAGTTTGCTTTTGGCTTGAAGACTACGAAACCTAGACATAGAATAGCTACAGAAATACAACGAATCAAATCCAAAGTTGTAACTGTATCTCAAGAACGTCCAAGCATAACTGGTGTAGGTTCAAGTTCAAGTAAAAGGCGTTCACCAAGGCTTGATAGTCAAgGTGATGCCCTTTTGCTAGAGGAAGCTGATCTAGTTGGAATTGAAGAACCAAAGAAGCAACTTTGTGATCTGCTTTTCAAAGATGAAACAAATAGAGCTGTGATTTCAATCTATGGTATGGGAGGTTTAGGGAAGACAACATTGGCAAAACAAGTCTATGATGATCCAGAAGTCAAGAAATGTTTCAGGATTCATGCTTGGGTTAATCTCTCACAATCTTTCAAAATGGAAGAGATATTGAAAGACCTTGCACAACAACTCCATAATGTTATTGGAAAACCAGCTCCAGAATCAATTGGAATGATGAAAATTGAGAATCTGAAAGAGTTTATCAAGAATTTTCTTCAGAGAAGTAAGAAATATCTAATTGTGCTTGATGATGTGTGGAATATGAATGTATGGGATGCGGTGAAGCATGCTTTGCCTAATAACAATTGCGGCAGTAGAGTGATTCTTACGACGCGCAAGAAAGATATAGCCTTGTATTCTCGTGCAGAACTGGGTAAGGATTTTGACCTTGAATTCTTACCTAGGCAACAAGCATGGTCTCTTTTTTGTAGGAAGACATTTCAAGGTAAGTCATGTCCTCCACATCTTGAAGAAGTTTGTAGGAAAATCTTGAAATTGTGTGGAGGGTTGCCATTAGCAATTGTGGCAATCAGTGGTGTTTTGGCTACAAGAGAAATATCAAACATAGAAGACTGGAACATGGTTTGCAGATGTTTTGGTTCTGAAATTGAACGCAATGACATATTGAAAGTTATGAACAAAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCCTTAAGTTTCAATGAATTGCCTTACTATCTTAAATCATGTTTGATGTATTTAACCGTCTTCCCGGAGTTTCACGCTATCGAGCACATGAGATTGATTCGATTGTGGATAGCTGAAGGGTTTGTGAAAGATGAAGATGGTAAGACACCGGAAGAAGTTGCAGATAGTTACCTAAAGGAACTTTTGAACAGAAGTTTAATCCAAGTGGTAGAAAAAACAAGTGATGGAAGGATGCGTACATGTCGAATGCATGGTCTTACAAGGGAAATTGTTAATTTGAAGTCAAGAGATCAGAACTTTGCAACAATAGCCAAAGATAACGACATGGTATGGCCGGAACGAGTTCGCCGTTTATCGGTGATAAATTCATCACAAAATGtatttcaacaaaataaaactacatTTCAACTTAGGTCTCTGCTAATGTTTACATCATCAGATTCACCCAATCATTTTTCTATGCATGAATTATGCACCTCCAGTGGTGTTAAGTTGCTCAATGTGTTAGATTTGCAAGATGCACCTTTGGAGGTTTTTCCTGCTGAAATTGTAAACCTTTACCTTCTGAAGTATCTAAGTTTGAAGAATACAAAGGTTAAAAACATTCCAGGATCCATTAAAAAGCTGCAATACCTGGAGACGCTAGATCTTAAACACACTTATGTCACTGAATTGCCTGCTGAAATTGCAGAGCTGAAACGATTATGCCATCTTCTGGTGTATCGTTACAAGATTGAATCATATGCTCATTTCAGCTCAAGGCATGGCTTCAATGTGGCTGCACCTATAGGAAACATGCTATCTTTGCAAAAGCTTTGTTTCATAGAAGTAGATCAAGGAAGTGAAGCCTTGATGGTTGAGTTGGGAAAACTTACTCAACTTAGGAGGCTAGGCATTAGAAAAATGAGGAAAGAAGATGGTGCTGCTTTGTGTTTATCGATTGAGAAAATGGTCAATCTTACATCACTATCTATAACTGCAATAACAGAAGATGAGATAATTGATATTCACAGCATTTCAAAGCCTCCTCAGTATCTTCAGAAGTTATACTTGAGTGGATGTTTAGAGAAGTTTCCACAATGGATAAAATCTTGCAAGAATTTAGTCAGAGTTTTCTTAAAATGGAGCAGGTTAAAGGAGGATCCTCTGGTGTACCTTCAAGGTTTGCCAAATCTTCGACATCTTGAGTTTCTTAAAGTTTATGTTGGTGAGATATTGAAATTCAATGCAAAAGGGTTCCCAAGTTTGAAGGTGTTAGGCCTTGATGATTTAGAAGGACTGAAATATATGAATATTGAGGAAGGAGCAATGCAAGGTCTTAAAAAGTTGGTAATTCAGCAATGTGCCTCATTGAAGAATGTACCATTAGGCATTGAACGCTTAACTAAGCTAAAAGCAATTGAGTTATTTGATATGCCTAAAGAATTGATTATGGCACTGCGCCCAAATGGAGGTGAAGATTATTGGAAAGTACAGAATGTTCCAACAATTTATTCTACTTATTGGAGGGATCGTGGTTGGGATGTTTATCCAATAGAGACTTTTGGGGAGATAGAGAATGATACCGATCATAGTAGTGCATTGAGGACTCTTCAGCTTCCTCCTCTTTGGAAGGTTTAA 2889 0.3621 MADSSVSFLVDKLSSLLKEEVNLEKGVLKDVEYIKDELKHYKAILMEVDSLEHKDLELKDWVQSVRKITEDMEDAIDEYNLCLVDHHQQSKNNVIHKFAFGLKTTKPRHRIATEIQRIKSKVVTVSQERPSITGVGSSSSKRRSPRLDSQGDALLLEEADLVGIEEPKKQLCDLLFKDETNRAVISIYGMGGLGKTTLAKQVYDDPEVKKCFRIHAWVNLSQSFKMEEILKDLAQQLHNVIGKPAPESIGMMKIENLKEFIKNFLQRSKKYLIVLDDVWNMNVWDAVKHALPNNNCGSRVILTTRKKDIALYSRAELGKDFDLEFLPRQQAWSLFCRKTFQGKSCPPHLEEVCRKILKLCGGLPLAIVAISGVLATREISNIEDWNMVCRCFGSEIERNDILKVMNKVXXXXXXXXXXXXXXLSLSFNELPYYLKSCLMYLTVFPEFHAIEHMRLIRLWIAEGFVKDEDGKTPEEVADSYLKELLNRSLIQVVEKTSDGRMRTCRMHGLTREIVNLKSRDQNFATIAKDNDMVWPERVRRLSVINSSQNVFQQNKTTFQLRSLLMFTSSDSPNHFSMHELCTSSGVKLLNVLDLQDAPLEVFPAEIVNLYLLKYLSLKNTKVKNIPGSIKKLQYLETLDLKHTYVTELPAEIAELKRLCHLLVYRYKIESYAHFSSRHGFNVAAPIGNMLSLQKLCFIEVDQGSEALMVELGKLTQLRRLGIRKMRKEDGAALCLSIEKMVNLTSLSITAITEDEIIDIHSISKPPQYLQKLYLSGCLEKFPQWIKSCKNLVRVFLKWSRLKEDPLVYLQGLPNLRHLEFLKVYVGEILKFNAKGFPSLKVLGLDDLEGLKYMNIEEGAMQGLKKLVIQQCASLKNVPLGIERLTKLKAIELFDMPKELIMALRPNGGEDYWKVQNVPTIYSTYWRDRGWDVYPIETFGEIENDTDHSSALRTLQLPPLWKV 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01156 962 Gene3D Ribonuclease Inhibitor 522 904 IPR032675 -
Tsu05g01156 962 PANTHER DISEASE RESISTANCE PROTEIN RP 1 140 IPR044974 GO:0006952
Tsu05g01156 962 PANTHER DISEASE RESISTANCE PROTEIN RP 154 920 IPR044974 GO:0006952
Tsu05g01156 962 PANTHER OS08G0539900 PROTEIN 1 140 - -
Tsu05g01156 962 PANTHER OS08G0539900 PROTEIN 154 920 - -
Tsu05g01156 962 PRINTS Disease resistance protein signature 184 199 - -
Tsu05g01156 962 PRINTS Disease resistance protein signature 265 279 - -
Tsu05g01156 962 PRINTS Disease resistance protein signature 360 374 - -
Tsu05g01156 962 PRINTS Disease resistance protein signature 630 646 - -
Tsu05g01156 962 Gene3D - 422 517 IPR036388 -
Tsu05g01156 962 Gene3D - 5 112 - -
Tsu05g01156 962 Pfam NB-ARC domain 165 395 IPR002182 GO:0043531
Tsu05g01156 962 Pfam Rx N-terminal domain 6 92 IPR041118 -
Tsu05g01156 962 CDD RX-CC_like 2 126 IPR038005 -
Tsu05g01156 962 SUPERFAMILY L domain-like 508 899 - -
Tsu05g01156 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 441 IPR027417 -
Tsu05g01156 962 Gene3D - 151 316 IPR027417 -
Tsu05g01156 962 Gene3D - 326 408 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01156 Tsu-Chr5 10168607 10172528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01156 185 367 WRKY Transcription Factor Family AT5G45050 26.087 1.40e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01156 K13457 - gmx:100305458 1350.88