Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01148 ATGCCACAAAACACCACTCATCCTCATTGGTATTCATCAAAAACTGGAATTTACAATAGTATAAACTCTCCTAGGAACATTCCAACCGACCCTTTACTCGACGTTGTTTCCTTCATTTTTTCTCACCCTCATGATGGGGTTTTGGCCCTTATTGATCACTCAACTGGGTCTTCTATTTCTTACTCAAAGTTGTTACCTTTAGTCAAATCAATGGCTTCTGGTCTTCATAAAATAGGTGTTTCACAAGGTGATGTGGTTTTGCTTCTACTTCCAAATTCAATTTACTATCCCATAGTACTATTAGGTGTTATGTATCTAGGTGCTGTTGTTACACCATTGAATCCTCTAAGTAGTGTTGGCGAAATTCGTAAGCAAGTTAATGATAGTGGTGCAAGTTTTGCTTTTACTATACCTGAAAATGTTAAGAAACTAGAGCCATTAGGCATGCCTATTATTGTTGTGCCAGAAAATGAAAACGGTTTGAAGCATGAATCTTTCTCATGTTTTTTTAACCTGATTTATGGAAACTTCGATTTGTCTCAAAAGCCGGTTATTAAACAAGAAGACACTGCTGCTATATTGTACTCTTCTGGTACAACAGGTGCGAGCAAAGGAGTCGTTTTAACTCATAGAAATTTTATTGCTATGGTTGAGCTTTTTATGAGGTTTCAAGCTTCTCAATATGAATACTCTAGTTCCAAAAAGGTGTATCTAGCTGTTGTGCCAATGTTCCATTTATATGGTTTATCGCATTTTGCTATGGGATTATTGTCGTTGGGATCAACAATCGTAGTAATGAGGAAATTTGACATTGATGAGGCTATTACGGTGATTGGTAAATACAATGTTACACACTTTAATGTTGTTCCACCGATATTGTCGGCATTGACAACGAAGGCAAAGGGTGTTAAGGGAAGTAAGTTGCAGAGTTTAAGACAGGTCACTTGCAGTGCAGCACCTTTGAGCATAGGAGCTATCGATGATTTTGTTCAAGCTTTCCCTAATGTTGATTTTATACAGgGTTATGGAATGACTGAGTCAGGCGGATCAGTAGCACACGGCTTCAATACTGAAAAATTTCACAACTATTCTTCACTAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTAGATTGGAATAGTGGTGCATTTTTGCCTCCAGGCAGCAATGGTGAGATTTGGTTAAGAGGGCCTTCAATTATGAAAGGATACTTAAATAATGAGGAAGCTACAATGTCAACAATTGATAAAGATGGTTGGTTACATACTGGAgatattgtttattttgatcaggatggatatttatttttgtctgaTCGATTGAAAGACATGATCAAATACAAAGGCTTTCagATTGCTCCTGGTGATTTAGAAGCTGTGTTAATTTTGCATCCTGAAATAGTTGATGCCGCCGTTACAAGTGCCAAGCATGGTGAAGCTGGGGAGATTCCAGTGGCATTTGTGGTTAAGAAGGTTGGAAGTGTACTTTCTACAAAGGACGTTATCGATTATGTTGCGAAACAGGTTGCTCCACACAAGAAGATTCGGAAAGTTGTCTTTACCGACAAGATACCAAGATCTGCGACTGGGAAGATCCTCCGAAGGCAACTCAAAAATTACTTGACTTGTAAACTCTAA 1641 0.3754 MPQNTTHPHWYSSKTGIYNSINSPRNIPTDPLLDVVSFIFSHPHDGVLALIDHSTGSSISYSKLLPLVKSMASGLHKIGVSQGDVVLLLLPNSIYYPIVLLGVMYLGAVVTPLNPLSSVGEIRKQVNDSGASFAFTIPENVKKLEPLGMPIIVVPENENGLKHESFSCFFNLIYGNFDLSQKPVIKQEDTAAILYSSGTTGASKGVVLTHRNFIAMVELFMRFQASQYEYSSSKKVYLAVVPMFHLYGLSHFAMGLLSLGSTIVVMRKFDIDEAITVIGKYNVTHFNVVPPILSALTTKAKGVKGSKLQSLRQVTCSAAPLSIGAIDDFVQAFPNVDFIQGYGMTESGGSVAHGFNTEKFHNYSSLGLLAPNMEAKVVDWNSGAFLPPGSNGEIWLRGPSIMKGYLNNEEATMSTIDKDGWLHTGDIVYFDQDGYLFLSDRLKDMIKYKGFQIAPGDLEAVLILHPEIVDAAVTSAKHGEAGEIPVAFVVKKVGSVLSTKDVIDYVAKQVAPHKKIRKVVFTDKIPRSATGKILRRQLKNYLTCKL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01148 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 541 - -
Tsu05g01148 546 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 7 541 - -
Tsu05g01148 546 SUPERFAMILY Acetyl-CoA synthetase-like 44 541 - -
Tsu05g01148 546 Pfam AMP-binding enzyme 47 448 IPR000873 -
Tsu05g01148 546 Gene3D - 444 544 IPR045851 -
Tsu05g01148 546 Gene3D - 21 443 IPR042099 -
Tsu05g01148 546 Pfam AMP-binding enzyme C-terminal domain 458 532 IPR025110 -
Tsu05g01148 546 CDD 4CL 27 538 - -
Tsu05g01148 546 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01148 Tsu-Chr5 10063584 10065804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01148 4 543 Monolignol Biosynthesis Gene Families AT4G19010 58.974 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01148 K01904 - gmx:100804808 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01148 05 10063584 10065804 Tsu05g01148 05 10063584 10065804 ECH