Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01134 ATGAGCGTTCAACCACCGCCGCAGCTGATGTGGCCACCATCAAATCATCCACCGTTCACAGTATCCCAATGGCAAGAGTTAGAACATCAAGCTCTCATCTTCAAGTATCTCAAAGCTGGTTTATCTGTTCCACCAGACCTTCTTTTACCTATTCGGAAAAGTCTTCAATTGATGTCTCACCCATCTCTGGGttattatggtaaaaaaattgacCCAGAACCAGGTAGGTGTAGAAGAACAGATGGAAAAAAATGGAGATGTGCTAGGGATGCTCATCCTGATTCTAAGTACTGTGACCGTCATATGATACGACGTCGTTACCGTTCAAGAAAGCCTGTGgaaacttcttcttcttctcaatcTTCTTCTTCAGTTTCAGTTTCTAGTACTTCACAACAACTTGGTTCTTCTGTTGGAACTGCTACTGTTTCTGCTTCTGCTACTGTTACTGCTACTGCTGCTTCAACCTTCCATACTCTTCCTTTGCATACAAATGGTACTCGTGAAGGTTTAAGTTTCACTCTTGGGAACACCATACCCCACATGGACCCTATGCTTTTTCCTCTTCAAGGTTCTAAGAAATCCTATAGGTTTGGACTGAACACCGAACCAGAAGAGCACAACCTCTTACAGAAAGATTTTGGAACTGTGAAGTATCAAGGCTACGACTTCACTTCAGATGACACTTGGTATAATAACATGTCTCAGATTCCATCAAACAGCGTGTCAGAATCAAGGACTGGTTCTACCATGGTTAACAACGGCAACTACTTCCAACAGCAGCGAACAACACGAGAACCTGAACAGCTCTTTAACCTCGACAATGCAAGGTCCAAGGAAATCGTCTTTAACAGCCAGTTAGGTAACTTGAAACAGGAATATCAATCTTCGCAATCTCTCTTCAGTGACTGGCAGTGGAAGAAAGATTTATCCTCCTCTACCATGGAGTATAGGCCAAGCAAGGATTTTAACACCAATCCAGATATCAATGCAGATTCAAACCCTACTTTATGA 1014 0.4122 MSVQPPPQLMWPPSNHPPFTVSQWQELEHQALIFKYLKAGLSVPPDLLLPIRKSLQLMSHPSLGYYGKKIDPEPGRCRRTDGKKWRCARDAHPDSKYCDRHMIRRRYRSRKPVETSSSSQSSSSVSVSSTSQQLGSSVGTATVSASATVTATAASTFHTLPLHTNGTREGLSFTLGNTIPHMDPMLFPLQGSKKSYRFGLNTEPEEHNLLQKDFGTVKYQGYDFTSDDTWYNNMSQIPSNSVSESRTGSTMVNNGNYFQQQRTTREPEQLFNLDNARSKEIVFNSQLGNLKQEYQSSQSLFSDWQWKKDLSSSTMEYRPSKDFNTNPDINADSNPTL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01134 337 MobiDBLite consensus disorder prediction 315 337 - -
Tsu05g01134 337 MobiDBLite consensus disorder prediction 108 135 - -
Tsu05g01134 337 Pfam QLQ 18 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tsu05g01134 337 PANTHER - 1 332 IPR031137 GO:0005634|GO:0006351|GO:0032502
Tsu05g01134 337 ProSiteProfiles QLQ domain profile. 18 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tsu05g01134 337 MobiDBLite consensus disorder prediction 113 135 - -
Tsu05g01134 337 SMART QLQ_2 17 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tsu05g01134 337 Pfam WRC 72 114 IPR014977 -
Tsu05g01134 337 ProSiteProfiles WRC domain profile. 71 115 IPR014977 -
Tsu05g01134 337 PANTHER GROWTH-REGULATING FACTOR 1 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01134 Tsu-Chr5 9947924 9950840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01134 17 114 GRF Transcription Factor Family AT3G13960 58.182 6.16e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Tsu05g01134 WRC 3.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01134 - - gmx:100809947 427.172