Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01131 ATGTTTGAATGCATGAGAAGTTGTACAAAGCAAGTGGTGGAAGATGAGGATGAAGAACGTGTCCGTCAGAGTGGCACGCCGACCACTAAACCAGCCGTCAAAAGCCTGACTGGACAGATTAAAGACATGGTGCTGAAGTTAAAGGGTGCTGACAAAAGTGGACTGAAATCATCTACCAATTCTGAAGGGGTTCAATACCCTTACATGGGAGGATTAAGCTCAGGTTCAACTCCTCCGTGGGACTTAAGCGCCAATTTTGCCGGTGGAAGATCAGACCAAGGGTTTATAGGGGGAACTAGTGGTAACACAACCCCTAGAGTGCAAGAGCAAGTTGTAGCAGCTCCTAAGGCAGTGGTGGAGGAGGCGGATGGAAACAAAGAGTGGGTGGCACAGGTGGAGCCAGGGGTTGATGTTACCTTTGTTTCTCTTCCTGATGGTGGAAATGATCTCAGAAGAATTCGCTTCAACCGAGATATGTTTGATAAGTGGCAAGCTCAAGTATGGTGGGGTGAGAATTTCGACAGACTAAGGGAGCTTTATAACGTCCAGACATTCAATCGTCAAGCTCTTAACACTACTGCTCCACCATCTGAAGATGAGCAAAGAGATTCTGCTGCTTATTGGAGGCTTCATACTGGAGGAGATAGCCCTAAGGCTGGATGGTTCAATGATTCAGCAGAAAGGAATCAGTACTATAATCCTGCAAGATTCACTATGGGTCAAGGAAGCAGTAGCCACCAACAAATTCATGCAGCAGGATCATCCATGGAAGCATCAAGGACTTCTTCTAAAGATGAGCTTTCCTTCAGCAATGCAAGTGAAATTGAATCTGAATGGTTGGAGCAAGTTGAGCCTGGAGTGTTTGTTACAATCAGGCAGTTACCTGATGGGAACAAAGAGATTCGTCGTATCAGATTCAGCCGAGAGAGGTTTGGAGATGCAGAGGCAAGGAAATGGTGGGAAGACAACAGAGAAAGAGTGAATGCTCAATTCCTGTGA 999 0.4615 MFECMRSCTKQVVEDEDEERVRQSGTPTTKPAVKSLTGQIKDMVLKLKGADKSGLKSSTNSEGVQYPYMGGLSSGSTPPWDLSANFAGGRSDQGFIGGTSGNTTPRVQEQVVAAPKAVVEEADGNKEWVAQVEPGVDVTFVSLPDGGNDLRRIRFNRDMFDKWQAQVWWGENFDRLRELYNVQTFNRQALNTTAPPSEDEQRDSAAYWRLHTGGDSPKAGWFNDSAERNQYYNPARFTMGQGSSSHQQIHAAGSSMEASRTSSKDELSFSNASEIESEWLEQVEPGVFVTIRQLPDGNKEIRRIRFSRERFGDAEARKWWEDNRERVNAQFL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01131 332 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 332 - -
Tsu05g01131 332 ProSiteProfiles BRX domain profile. 277 332 IPR013591 -
Tsu05g01131 332 Pfam Transcription factor regulating root and shoot growth via Pin3 276 330 IPR013591 -
Tsu05g01131 332 Pfam Transcription factor regulating root and shoot growth via Pin3 126 180 IPR013591 -
Tsu05g01131 332 MobiDBLite consensus disorder prediction 239 267 - -
Tsu05g01131 332 Pfam Transcription factor BRX N-terminal domain 26 47 IPR027988 -
Tsu05g01131 332 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 332 IPR044532 -
Tsu05g01131 332 ProSiteProfiles BRX domain profile. 126 181 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01131 Tsu-Chr5 9896303 9900374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01131 1 332 Major Intrinsic Protein MIP AT1G31880 48.451 3.46e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01131 - - mtr:MTR_5g026970 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01131 05 9896303 9900374 Tsu05g01131 05 9896303 9900374 ECH