Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01103 ATGTCCCTTCTCAGCAGATTCTTCTACAAAAGACCCCCAGATGGTTTACTTGAATTCATCGATAGAGTTTACGTTTTCGATTCATGTTTCTCAACAGAAGCATTACCTGATGGAATGTATCAGCTATATCTTCATGAAATTGTGACTGAATTACATGAAGAGTTTCCTGAATCTTCGTTTTTAGCTTTCAATTTTCGTGAGGGAGAGAAACGTAGTGATTTTGCTGAGATAATGTGTGATTATGATGTTATTGTTATGGATTATCCAAAACAATATGAGGGTTGTCCTCTTTTACCACTTTCTCTTGTTCAGCATTTTCTTCGTGTTTGTGAGAGTTGGCTTTTACTTGGTAATCATCAAAATGTGATTTTGTTTCATTGTGAAAGAGGTGGTtggccacttttggcttttttgTTGGCTAGTTTGTTGATTTTTAGAAGGGTTCATAGTGGTGAACGTAGGACACTTGATATGGTTCATAGAGAAGCACCTAAGGGTTTGTTGCAGTTGTTATCGCCTTTGAATCCTTTGCCTTCGCAGCTTCGTTATATTCAATATGTTGCGAGGAGGAATATTGCTCCTGAGTGGCCTCCACCGGAGAGGGCTTTGTCTTTGGATTGTGTTATTCTTAGGGGGATTCCTAGTTTTGATTCCTCTAATGGATGTAGGCCAATGTTTAGGATTTTCGGGAGGAATTTGCTTAGTAGAGGAGGACTTTCTACTCAGATGATTTATAACATGCACAAGAAGAAGCATTTGAGGCATTATCGCCAGGTAGACTGTGATGTGATTAAGATTGATATTCAATGTTTAGTGCAAGGAGATGTGGTTTTGGAGTGTGTccatttggatttggatccgGAAAGGGAAGTGATGATGTTTCGTGTGATGTTCAATACAGCGTTTATTCGATCCAACATATTGATGCTGAACACTGAAAACTTGGACATTCTTTGGGATTCGAAGGAACGGTATCCGAAAAGCTTTCGGGCTGAGGTTTTATTTGGGGAGGTTGAAAACATAAGTCCTCAGAGAGCTCCGACAGAGACAGCTATTTTGAATGGCGAGGAGAAAGGTGGATTACCCATTGAAGCATTTTCAAGAGTTCAAGAACTTTTTAGTGGAGTGGATTGGGTTGATAGCGGTGATGCTGCAGCAGTGTGGCTGCTTAGACAGCTTAGTGTCTTAAATGATGCCAAAGAGTTTTCGAGGTTGCAAGGTAAAGGAAGTTGGTTTTCGTCACCAGCTGActctgaagaagaaaataatgaatcaAGTGTTGCTGATAGTTCAGATGAGGCCTCTGATGTTACTCCCAATTCTTTTGCCGATCCTTCAAAATTATTGACATCTGACAACCCTGATTTGGATCTAAAAGCATTGGAAAACAATGGTGGAAATTGTGTAAATCTCACTTCACAAATGCCTGATCAGTTATTGACTAAAAATGCTCCTGGTCTACCTCCACCTCCACCCCCTCCCCCTTTCATGGCCAGCAATGCTAGCAGTGATTCCACATTGCCATCACCTCCTCCTTCAGGACCTGTACATACAAGTTCAGTCCCATTACCTCCACCTCCACCACCTCCTCCAGGATTTGCTCGAACAGGTTCAACCCCACCACCTCCACCTCCCCCTCCTCCTGGTCCGGTACGAACAAGTTCAATCCCACCACCACCGCCTCTTCCAGGTACTGTACAAATAGGTTCATCCCTGCCCCCTCCACCTCCACCTCTTCCAGGTGTTACCCGGTCAGCCCCACCACCTCCACCTCCTCCTCCAGTTCCGGTACGAACAGGTTCCGCCCCGCCACCTCCACCACCTCCTCCAGCTCCCATACGAACAGGTTCAGCTCCTCCACCTCCACCACCTCCTCCACCTCCTCCAGGTTCAGTACAAACAGGTTCTGCCCCACCACCTCCACCCCCACCACCTCCAGGATCTACACGAACAGGATCAGTTCCACCACCTCCACCGCCCCCTCCAGGTTCTACACAAATAAGATCATCCCCACCAcctccaccaccacctccaGGCCCTCCACGAATAGGATCGGCCCCACCACCTCCACCACCTCCTCCAGGTCCTTCACGAACAAGTTCAGCTCCACCACCTCCACCACCTCCTCCAGGTGCACGAACAGTTTTGGCTCCACCACCTCCACCACCTCCTCCAGGTGCACGAACAGGTTCAGGTCCaccgccaccaccaccaccaccaggtTCAGTTCGAGCAGGTTCAGCCCCACCACCTCCACCTCCTCCAGGTGGACGGACGGGTTCAGCTCCACCAGCACCCAAGCCTCCAAATGCTCCCCCTCCACCACCACCTGGCCGTGGTTCGGTGCCGGCACCTCCACTTACTGCAGGCAAGGCCTCTAGTGTGCCTCCACCACTAGGCAAAACTTCTTTAGCAACAACAAATGTGGGAAGAGGTCGTGGTACTGGTGCTATTGCTGCTAAGAAAACTTTGTTAAAGCCCCTACATTGGGTGAAAGTTTCTCGAGCAGCACAAGGGAGTCTATGGGCTGATTCACAGAAACAAGGCAGTGGTTCAAGGGCCCCTGAAATAGACATATCGGAACTTGAGACCCTGTTTTCAGCAGCATCTATTTCTGATGGAAATAGTACTAGAGGTGGAGTTCGGCGTGGTTCTAATATTAACAAACCTGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCtctctaaaatcaaaattcctTTGCCAGACATGCTTAGTGCAGTTTTGGCATTGGATTCTGGTGTTCTGGATATTGATCAAGTTGAGAATCTCATCAAGTTCTGTCCCACAAAGGAAGAGATGGAGATACTAAAGAACTATGCTGGGAACAAGGATATGCTTGGGAAGTGTGAGCAGTTTTTTATGGAGCTGATGAAAGTTCCACGAGTAGAAGCCAAGTTAAGAGTGTTTGCTTTTAAAATCACCTTTTCTGCTCAGGTGAGCGATTTAAGGATAAATTTGAATACAATCAATGATGCAACCAGAGAGGTCAAAGAATCGGTAAAATTGCGTCAAATAATGCAAACTATTCTTACGTTAGGCAACGCTTTGAATCAGGGAACAGCACGAGGATCAGCAGTAGGATTCAAATTGGACAGCCTTCTCAAATTATCTGATACCCGTgcaagaaataataaaatgactTTAATGCACTATTTGTGTAAGCTTCTTGCTGAGAAAATGCCAGAATTGATAGATTTTGACAAGGATCTTGTGCATTTAGAAGCTGCTTCTAAGATCCAACTAAAAGCATTAGCTGAAGAAATGCAAGCTGTGCATAAAGGTTTGGAGAAAGTTGAGCAAGAACTAACTGCTTCTGAAAATGATGGTGCTATATCTTCAGGATTTCGCAAGGTGTTGAAgaattttcttgattttgctGAAGCTGATGTGAGGTCACTTATATCATTGTATGCCGATGTGGGAAGAAATGCCGATTCTTTGTCCCAATACTTTGGGGAGGATCCAGCTAGGTGCCCCTTTGAACAAGTGACACAAATACTTGTTGTCTTTGTAAAGACCTTCAACAAGTCAAGGGAGGAGAACGAAAGGCTAGCAGATGCTGAGAAAAAGAAATTAGAGAAAGAAGCCATGAAAGACAAGGCAGCAAATAACGTGCATTCTAGAAAAGATGTTGTTCGATAG 3687 0.4331 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEALPDGMYQLYLHEIVTELHEEFPESSFLAFNFREGEKRSDFAEIMCDYDVIVMDYPKQYEGCPLLPLSLVQHFLRVCESWLLLGNHQNVILFHCERGGWPLLAFLLASLLIFRRVHSGERRTLDMVHREAPKGLLQLLSPLNPLPSQLRYIQYVARRNIAPEWPPPERALSLDCVILRGIPSFDSSNGCRPMFRIFGRNLLSRGGLSTQMIYNMHKKKHLRHYRQVDCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNTENLDILWDSKERYPKSFRAEVLFGEVENISPQRAPTETAILNGEEKGGLPIEAFSRVQELFSGVDWVDSGDAAAVWLLRQLSVLNDAKEFSRLQGKGSWFSSPADSEEENNESSVADSSDEASDVTPNSFADPSKLLTSDNPDLDLKALENNGGNCVNLTSQMPDQLLTKNAPGLPPPPPPPPFMASNASSDSTLPSPPPSGPVHTSSVPLPPPPPPPPGFARTGSTPPPPPPPPPGPVRTSSIPPPPPLPGTVQIGSSLPPPPPPLPGVTRSAPPPPPPPPVPVRTGSAPPPPPPPPAPIRTGSAPPPPPPPPPPPGSVQTGSAPPPPPPPPPGSTRTGSVPPPPPPPPGSTQIRSSPPPPPPPPGPPRIGSAPPPPPPPPGPSRTSSAPPPPPPPPGARTVLAPPPPPPPPGARTGSGPPPPPPPPGSVRAGSAPPPPPPPGGRTGSAPPAPKPPNAPPPPPPGRGSVPAPPLTAGKASSVPPPLGKTSLATTNVGRGRGTGAIAAKKTLLKPLHWVKVSRAAQGSLWADSQKQGSGSRAPEIDISELETLFSAASISDGNSTRGGVRRGSNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLSAVLALDSGVLDIDQVENLIKFCPTKEEMEILKNYAGNKDMLGKCEQFFMELMKVPRVEAKLRVFAFKITFSAQVSDLRINLNTINDATREVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELIDFDKDLVHLEAASKIQLKALAEEMQAVHKGLEKVEQELTASENDGAISSGFRKVLKNFLDFAEADVRSLISLYADVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKTFNKSREENERLADAEKKKLEKEAMKDKAANNVHSRKDVVR 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01103 1228 MobiDBLite consensus disorder prediction 479 813 - -
Tsu05g01103 1228 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 187 IPR029021 -
Tsu05g01103 1228 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 338 IPR035892 -
Tsu05g01103 1228 PANTHER FORMIN-J 1 1218 - -
Tsu05g01103 1228 MobiDBLite consensus disorder prediction 407 421 - -
Tsu05g01103 1228 MobiDBLite consensus disorder prediction 1196 1228 - -
Tsu05g01103 1228 MobiDBLite consensus disorder prediction 407 461 - -
Tsu05g01103 1228 MobiDBLite consensus disorder prediction 428 448 - -
Tsu05g01103 1228 MobiDBLite consensus disorder prediction 483 498 - -
Tsu05g01103 1228 Gene3D - 197 341 - -
Tsu05g01103 1228 Pfam Formin Homology 2 Domain 820 1189 IPR015425 -
Tsu05g01103 1228 ProSiteProfiles C2 tensin-type domain profile. 200 338 IPR014020 -
Tsu05g01103 1228 SMART it6_source 448 1228 IPR015425 -
Tsu05g01103 1228 ProSiteProfiles Formin homology-2 (FH2) domain profile. 815 1215 IPR015425 -
Tsu05g01103 1228 SMART PTEN_C2_2 198 337 IPR014020 -
Tsu05g01103 1228 Gene3D Formin, FH2 domain 816 1200 IPR042201 -
Tsu05g01103 1228 MobiDBLite consensus disorder prediction 508 783 - -
Tsu05g01103 1228 Coils Coil 1096 1116 - -
Tsu05g01103 1228 Coils Coil 1190 1219 - -
Tsu05g01103 1228 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Tsu05g01103 1228 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Tsu05g01103 1228 SUPERFAMILY Formin homology 2 domain (FH2 domain) 890 1218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01103 Tsu-Chr5 9648686 9657563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01103 1 434 FH2 protein (formin) Gene Family AT1G31810 77.701 0.0 752
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01103 05 9648686 9657563 Tsu05g01103 05 9648686 9657563 ECH