Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01095 ATGTACGGTGGTGGAGGAGTCGGAGACGATGCTCTGGCTGCACGCTTAGGGATGATATCGCCGTCGCTACTAATTCCGACGACATCGATGATTTCCCGGGAGATATCTCCGGCGCCGGTGAGAGATGAGAGGCTTCCAACTCAGCTTCAGTGGAGTCAGCAGGAAACGAGAGAGTTCATAGCTATACGAGCAGAGCTTGAGAGAGACTTCACTGCTTCGAAGAGGAACAAGACGCTTTGGGAAGTGGTGAGTTCAAAGATGAGAGAGCGAGGGTATAGGAGAAGTCCTGAACAATGTAAATGCAAATGGAAGAATCTTGTTAATCGCTATAAgGGAAAAGAGACATCTGATCCAGAGCATGGCAGGCAATGTCCATTTTTTGAAGAGTTGCATGCTGTTTTTACTGAAAGAGCACATAACATGCAACGGTTACTTCTTGAATCCGAAACTCGTTCAGCTCAAACAAAGAAAGGAGTGAAAAGAATAAGAAGTGGAGATCGATCTTCAGAGGAATTCTCAGAAGATGATGAGGAAGTTGAAGACGACAGTGAAGAGGAGAGACCTGCGAGAAGCAATACCCGTAAAAGGAAAGCTGGCAAAATTGCAACGGAGAAGTCTTCAAGAGCAAACAATGCAAACAATAGTAATATTCAGGAAATGCTCAAGGAGTTTTTCCAGAACCAACTAAGGATGGAGATGCAGTGGAGGGAAATGATGGAAAGACGTGCACATGAAAGACAGTTGTTTGAACAGGAATGGCGGCAGTCAATGGAAAAGCTTGAGAGGGAGAGATTAATGATTGAACAGGAATGGAGGGAGAGAGAAGAGCATAGGAGACTGAGGGAGGAGAGTAGGGCAGAGAGAAGGGATGCTTTGTTGACGACCCTTTTAAACAAACTCATTCATGAATCTAACTAA 918 0.4499 MYGGGGVGDDALAARLGMISPSLLIPTTSMISREISPAPVRDERLPTQLQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGYRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAVFTERAHNMQRLLLESETRSAQTKKGVKRIRSGDRSSEEFSEDDEEVEDDSEEERPARSNTRKRKAGKIATEKSSRANNANNSNIQEMLKEFFQNQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQEWREREEHRRLREESRAERRDALLTTLLNKLIHESN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01095 305 Coils Coil 250 270 - -
Tsu05g01095 305 Gene3D - 51 112 - -
Tsu05g01095 305 CDD GT1 50 114 - -
Tsu05g01095 305 SMART sant 47 109 IPR001005 -
Tsu05g01095 305 Pfam Myb/SANT-like DNA-binding domain 50 132 IPR044822 -
Tsu05g01095 305 MobiDBLite consensus disorder prediction 146 215 - -
Tsu05g01095 305 MobiDBLite consensus disorder prediction 153 170 - -
Tsu05g01095 305 MobiDBLite consensus disorder prediction 185 203 - -
Tsu05g01095 305 PANTHER - 42 303 - -
Tsu05g01095 305 ProSiteProfiles Myb-like domain profile. 51 107 IPR001005 -
Tsu05g01095 305 PANTHER - 42 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01095 Tsu-Chr5 9557987 9560236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01095 36 305 Trihelix Transcription Factor Family AT2G38250 44.689 9.59e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tsu05g01095 Myb_DNA-bind_4 2.7e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01095 - - gmx:100812635 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01095 05 9557987 9560236 Tsu05g01095 05 9557987 9560236 ECH