Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01093 ATGGTGAAGGGACGCCAAGGAGAGCGTGTCAGGCTCTATGTGAGGGGTACAATCCTGGGATACAAAAGATCCAAATCAAACCAGTACCCAAACACATCGTTGGTGCAAATTGAAGGAGTGAACACCAAGGAAGAGGTAGCTTGGTTACAAGGCCTCACGGTAACAGTGGTGTTGTTCGTGCTAAATTCACGTCAAATCTTCCTCCCAAATCAATGGGATCTCGCGTAA 228 0.4737 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTKEEVAWLQGLTVTVVLFVLNSRQIFLPNQWDLA 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01093 75 Pfam Ribosomal protein L35Ae 12 58 IPR001780 GO:0003735|GO:0005840|GO:0006412
Tsu05g01093 75 SUPERFAMILY Translation proteins 12 57 IPR009000 -
Tsu05g01093 75 Gene3D translation elongation factor selb, chain A, domain 4 2 66 IPR038661 -
Tsu05g01093 75 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 55 - -
Tsu05g01093 75 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 55 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01093 Tsu-Chr5 9547853 9549403 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01093 1 51 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 90.196 5.74e-29 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01093 K02917 - dcr:108196770 103.605