Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01088 ATGCTAAAATCTAGGTGTGTTAGTAAACAATGGAACAACGTGACATACGGTAAGAAATTCATCAAGAAACAAGCGTTTCTTGCACATTCACATCTATTTCTCAATTTCACAACTGAATCTATTGTATTTAATATGGCATATCACCGTCAATCCTTTTTCGACGGCGAAGGTGTTCAAGCAATTATTTCTCTATACATTTTTATTCATGCACTTCTTAATGTAATATACAACAAAAAGTTACCACCAAGCCCTCCAACCATACCTTTCGTTGGTAACCTTTTTTGGCTTCTAAAGTCTTCAAAAAATTTCGCTGAACTTGAACCTGTCCTTCGTTCATTACGTTCTAAATACGGTGACATTGTTACCATTTTTATAGGTTCAAGACCTTCAATTTTCATTACATCTCATGAAGCTGCTCATAGAGCACTTGTTAAAAATGGTACAATTTTTGCTAATCGTCCCTTAGCACTTGAAACAACCAAACTATTCTTCCCTAAACAACATTCCATTAGTACGTCTGCTTATGGTCCAATTTGGAGACTACTGCGCCAAAATTTCATGCAAGCGACTCAACCTTCTCGGTTTAATGTGTTGAATTTCGTACCCATGTTGACTAGGATTGTGTTTAGAGGATTATGGAGAGAGATTTTGCAAATTCGTGAAAATCAAATGAATGTGTTTCTTCCTATTATAAAAGCGCgccaagagaaaataaaaagcaaGGTTAATGTCATAGATGGAGACGAAGATAAAGAGAACTTTGATGCTTATGTTGATACCCTTTTCGATTTAAAACTCCCGGATAGTGGAAACAAGCTAAATGATGAAGAGTTGGTGAGTTTATGTTCTGAATTTTTGTTAGGTGGAACAGACACAACAGCTACCACATTGTTATGGGCCATGGCTAATTTAGTAAAGAATCAAAACATTCAAGAGAAACTTTATGATGAAATTAAGGAAGTTGTGAAACacaatgaagaaattgaagaggaGCATTTGCAAAGGATGCCTTATTTGAAGGCTGTTGTGTTAGAAACATTTAGAAGACATCCACCAGGTCATTTTATATTGCCTAGGGCTGTTATACAAGAAACTATTATGGATGGttataaaataccaaaaaatgCAATGATTAATTTTCCTGTGGCTGAATTAGGGTGGGATCCAAATGTGTGGGAGAATCCAATGGAGTTTAAGCCTGAAAGATTTTTGAGTGGAGAGAatgttaattttgatttaaaaggGTTTAAAGAGATTAAAATGATGCCATTTGGTGCTGGGAGGAGGGTATGTCCAGGAATTAATATTGCAATGCTTCATCTTGAATACTTTGTGGCCAATTTAGTGAGAGATTATAAATGGACAATTGAAGATGGAAGTGAGGTTGACTTGAGTGAAAAACAAGCCTTCACTATTGTGATGAAGAATCCATTGAGGCCGTGTTTGTCTCCAAGAATTGCTTGA 1464 0.3436 MLKSRCVSKQWNNVTYGKKFIKKQAFLAHSHLFLNFTTESIVFNMAYHRQSFFDGEGVQAIISLYIFIHALLNVIYNKKLPPSPPTIPFVGNLFWLLKSSKNFAELEPVLRSLRSKYGDIVTIFIGSRPSIFITSHEAAHRALVKNGTIFANRPLALETTKLFFPKQHSISTSAYGPIWRLLRQNFMQATQPSRFNVLNFVPMLTRIVFRGLWREILQIRENQMNVFLPIIKARQEKIKSKVNVIDGDEDKENFDAYVDTLFDLKLPDSGNKLNDEELVSLCSEFLLGGTDTTATTLLWAMANLVKNQNIQEKLYDEIKEVVKHNEEIEEEHLQRMPYLKAVVLETFRRHPPGHFILPRAVIQETIMDGYKIPKNAMINFPVAELGWDPNVWENPMEFKPERFLSGENVNFDLKGFKEIKMMPFGAGRRVCPGINIAMLHLEYFVANLVRDYKWTIEDGSEVDLSEKQAFTIVMKNPLRPCLSPRIA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01088 487 Gene3D Cytochrome P450 75 193 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 Gene3D Cytochrome P450 194 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 PRINTS E-class P450 group I signature 138 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 PRINTS E-class P450 group I signature 114 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 Coils Coil 311 331 - -
Tsu05g01088 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Tsu05g01088 487 PANTHER CYTOCHROME P450 FAMILY PROTEIN 196 485 - -
Tsu05g01088 487 PANTHER CYTOCHROME P450 FAMILY PROTEIN 60 196 - -
Tsu05g01088 487 SUPERFAMILY Cytochrome P450 81 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 Pfam Cytochrome P450 192 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 Pfam Cytochrome P450 81 193 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 196 485 - -
Tsu05g01088 487 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 60 196 - -
Tsu05g01088 487 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01088 487 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01088 Tsu-Chr5 9524066 9527999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01088 193 485 Cytochrome P450 AT1G64940 55.405 1.57e-114 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01088 K24184 - pop:7491917 433.335