Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01087 ATGGGCATTTGTCTGATAAAAGGCCAATGGCTGTGGCTTCTGTATTTTTTGCTGATACATATTGTAATTAATAACATTGAAGCGATCAGTCCTGATGGCGAGGCACTTATCAACTTCAGGACAGCAATTACTGGCAATTATGGTATCCTGTTACAATGGAGGCCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCCAAAAACCAAGAGAGTGACACATTTGATTCTGTCATCCTATAATTTAATTGGGACTTTATCACCTGACCTTGGGAAGTTAGAGCATCTGAAAATTATTGATCTTCATTATAACAACCTCTATGGGATAATTCCACCAGAATTGGGAAATTGCACTGAATTACAGGGAATCTTTTTACAGCGTAATTACATTCTTGGACTGATTCCAAGTGAAATAGGAAATCTCTCGCAACTTCAAAATTTGGATTTATCAAACAATCTTCTTACCGGGAATATTCCAGTGTCAATTGGAAAGTTGTATAATCTAAAAAACTTCAATGTATCAACCAATTATCTGGTTGGACCAATACCTTATGATGGTGTCCTTGCCAACTTTACTGGAAGCTCGTTTGCTGGAAACCCAGGTTTGTGTGGAGTGCAAATCAATTCAAGTTGTAAAAATGGTGGTTCGCCTGGGAAAATATCTCCTGACCAAAGTCAAAATGCAAAGAAGAATCCTGGCCGACTTCTCATCAGTGCATCAGCAACTGTGGGCGCATTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAGAAGTTTGGTAAAAATGATAGAGTAAGGCTAGCAGTGGATGTTGGTCCAGGTGCCTCAATAGTTATGTTTCATGGAGACCTACCATATTCTTCGAAAGACATCATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGAGTAGGAGGATTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCGTTGAAAAGGATTGTAAAGTTGAATGAGGGCTTTGATCGTTTTTTTGAGAGGGAGCTTGCAATTCTTGGTAGCATCAAGCATcgttatttagttaatttacgTGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGACTACCTACCTGGTGGTAGTCTCGATGAAGTTCTTCATGAAAGATCTGAGCAACTAGACTGGGATTCACGGTTGAATATAATCATGGGAGCTGCAAAGGGGCTTGCTTACTTGCACCACGATTGTTCCCCTAGGATTGTACACCGAGACATAAAATCGAGTAATATTTTGCTTGATGGAAAATTGGATGCTCGGGTTTCTGATTTTGGACTTGCCAAACTTCTGGAGGATGAGGAATCTCACATCACTACTATTGTTGCTGGAACATTCGGTTATCTAGCTCCAGAGTACATGCAAAGTGGCAGAGCAACTGAGAAGACTGATGTCTATAGTTTTGGGGTGTTGACACTTGAAGTGCTTAGTGGAAAACGGCCAACGGATGCATCGTTCATTGAAAAGGGTCTCAATATTGTTGGTTGGGTATGTGATGCACGTTAa 1572 0.3944 MGICLIKGQWLWLLYFLLIHIVINNIEAISPDGEALINFRTAITGNYGILLQWRPEDPDPCKWKGVKCDPKTKRVTHLILSSYNLIGTLSPDLGKLEHLKIIDLHYNNLYGIIPPELGNCTELQGIFLQRNYILGLIPSEIGNLSQLQNLDLSNNLLTGNIPVSIGKLYNLKNFNVSTNYLVGPIPYDGVLANFTGSSFAGNPGLCGVQINSSCKNGGSPGKISPDQSQNAKKNPGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRVRLAVDVGPGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGVGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELAILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHERSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIVHRDIKSSNILLDGKLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNIVGWVCDAR 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01087 523 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Tsu05g01087 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Tsu05g01087 523 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 2 36 520 - -
Tsu05g01087 523 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 520 - -
Tsu05g01087 523 SMART serkin_6 305 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01087 523 ProSiteProfiles Protein kinase domain profile. 305 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01087 523 ProSitePatterns Protein kinases ATP-binding region signature. 311 337 IPR017441 GO:0005524
Tsu05g01087 523 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Tsu05g01087 523 SUPERFAMILY L domain-like 31 197 - -
Tsu05g01087 523 SUPERFAMILY Protein kinase-like (PK-like) 288 507 IPR011009 -
Tsu05g01087 523 Gene3D Phosphorylase Kinase; domain 1 281 380 - -
Tsu05g01087 523 Gene3D Transferase(Phosphotransferase) domain 1 381 523 - -
Tsu05g01087 523 Pfam Protein kinase domain 307 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01087 Tsu-Chr5 9510725 9520337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01087 1 519 Receptor kinase-like Gene Family AT2G35620 73.410 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Tsu05g01087 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01087 - - adu:107487087 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01087 05 9510725 9520337 Tsu05g01087 05 9510725 9520337 ECH