Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01081 aTGAAAGAATCATCAAAACCATGGAGACCATTTACATCAAATTGTTGCACAACAGAAAACCAAACaatcttaaaaaatttcagtaAATGTAAACCTTCACGTTCAGATTATTCTAAGAACATTGCTCCTTTACCATCTTTTAGGAGACTTTCTTTTTCTGATCTTAGTCGCTCGTCTTCGACGCGAATCAATGAAGATCTTGCACTTTCTTTTGGTtctgatttgtttgattttcaGCTTAGTGAACTTCGCGCTATTACTCAGAATTTTTCGAGTAATTTTTTGCTTGGCGAAGGTGGATTTGGAACTGTTCATAAAGGTTATTTAGATGATAATTTTAGACAAGGTTTGAAGGCTCAACCTGTTGCTGTTAAGCTTTTGGATATTGAAGGTTTACAAGGACATCGCGAATGGCTTGCAGAAGTGATTTTTCTTGGTCAGTTAAGGCATCCAAATTTGGTGAAATTGATTGGATATtgttgtgaagatgaagaaagaCTACTTGTCTATGAATTCATGCCAAGAGGAAGCTTGGAGAATCACTTATTTAGAAGACTAACATCAATACCTTGGGCAACAAGATTAAAAATTGCAATTGGTGCTGCTAAAGGCCTTTCTTTCTTGCATGGAGCTGAGAAACCAGTCATTTATAGAGACTTCAAGACTTCCAATGTCTTACTTGATTCGGACTTCACAGCAAAATTATCAGATTTTGGACTTGCAAAAATGGGGCCAGAAGGATCAAAGTCACATGTTACAACCAGAGTTATGGGCACCTATGGATATGCAGCCCCAGAATACATCTCAACAGGACACTTGACAACAAAAAGTGATGTCTATAGCTTCGGAGTTGTCCTGCTAGAACTACTAACAGGAAGAAGAGCGACAGACAAATCACGACCAAAGACAGAACAAAACATTGTGGATTGGACAAAGCCTTACTTGAGTAGTAGTAGAAGATTAAGGTACATAATGGATCCAAGGTTTGCAGGACAATATTCTGTCAAAGGTGCAAAAGAGATAGCACATTTGGCATTACAATGCATAAGTTTGCATCCTAAAGACAGACCAAGAATGGCAATGATTGTTGAAACACTTGAAAGCCTTCAACAGTTTAAGGATATGGCTGTCACTAGTGGACACTGGccaatatcatcaaaatctaCTAAAAATGGAGcatctaataataataaggtgAAAACTAAAGCAATTAGTGCAAATCAGAAGCAATTGGCTCCAGTTAGAAGCAAAAAAGTTTGA 1260 0.3524 MKESSKPWRPFTSNCCTTENQTILKNFSKCKPSRSDYSKNIAPLPSFRRLSFSDLSRSSSTRINEDLALSFGSDLFDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYLDDNFRQGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSIPWATRLKIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRATDKSRPKTEQNIVDWTKPYLSSSRRLRYIMDPRFAGQYSVKGAKEIAHLALQCISLHPKDRPRMAMIVETLESLQQFKDMAVTSGHWPISSKSTKNGASNNNKVKTKAISANQKQLAPVRSKKV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01081 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Tsu05g01081 419 ProSitePatterns Protein kinases ATP-binding region signature. 96 125 IPR017441 GO:0005524
Tsu05g01081 419 Gene3D Transferase(Phosphotransferase) domain 1 173 383 - -
Tsu05g01081 419 MobiDBLite consensus disorder prediction 383 419 - -
Tsu05g01081 419 PANTHER OS01G0588500 PROTEIN-RELATED 31 402 - -
Tsu05g01081 419 Pfam Protein tyrosine and serine/threonine kinase 96 366 IPR001245 GO:0004672|GO:0006468
Tsu05g01081 419 Gene3D Phosphorylase Kinase; domain 1 52 172 - -
Tsu05g01081 419 MobiDBLite consensus disorder prediction 383 412 - -
Tsu05g01081 419 ProSiteProfiles Protein kinase domain profile. 90 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01081 419 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL15-RELATED 31 402 - -
Tsu05g01081 419 SUPERFAMILY Protein kinase-like (PK-like) 70 367 IPR011009 -
Tsu05g01081 419 CDD STKc_IRAK 96 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01081 Tsu-Chr5 9481099 9483740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01081 78 382 Glycoside Hydrolase AT3G07070 51.613 7.60e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu05g01081 PK_Tyr_Ser-Thr 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01081 - - gmx:100814241 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01081 05 9481099 9483740 Tsu05g01081 05 9481099 9483740 ECH