Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01079 ATGGCAGGACAATCAAGAAAATGGATGATACTAATAGCAACAATATGGATTCAAGCATTTACAGgaacaaattttgatttttcatccTATTCATCAACAATGAAATCTGTTCTTAAGATTTCACAAGTTCAACTTAATTACTTAGCAACTGCTAGTGATTTGGGTAAAGTATTTGGTTGGTCTTCTGGTCTTGCTCTTATGTATCTTCCTATTTCTCTTGTTATGTTTATTGCTGCTTCTATGGGTCTTATTGGTTATGGCCTTCAATTTCTTCTCATCAATAACTTCATCTCTTTGCCTTATTTTCTGGTTTTTCTTCTGTGTCTGTTAAGTGGCTGCAGCATATGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATAAAAAATTTCCCAGTTAACAGACCCTTAGCATTATCACTCACAGTGAGTTTCAATGGTGTTAGTGCAGCACTCTACACTCTCGCCGCAAACTCAATAAACCCTTCATCAGATAACCTCTATCTTCTCTTAAATGCCCTTGTTCCTCTTCTCACTTCCATTGCAGCATTACTTCCAATCCTTCGCCAACCGCCTTTATCAGACACTTATTCTCCACACGCCGCTCGCCATAACTCAGTTATTTTTCTTACATTGAACATTTTAGCGGTTTTCACTGGCCTTTATCTTCTTATATTTGCGTCATCAACTTCTGATGAAGCCACATCAAGGTTTTACTTTGGTGGAGCTCTTATACTTTTAATCTCGCCATTATGTATTCCTGGTGTTATTTATGCGAGGGATTGGTTTCACCGCACTGTTCATTCGAGCCTTCGAGTTGAAAACACTGGCTTCATTCTTGTTCATGTTGATGATCTTGAGCTTCATAAAGAACTTCTTACACGTCAAAATAGTGCTCGTAATGTCAGCAATGGAGATGGTCAAAGCCTACTTGGTGAAAATGGATATGGAATTCAGAGGGCAAAAAGTAGTGATGTGAATTGTCACAAGTTTTTTGGGCAGAATCAATTGGAAATGCTTGGAGAAGAACATTCGGCCGCAGTTCTTGTAAAACGGTTGGATTTTTGGCTTTACTATGTTGCATACTTCTGTGGAGGTACTATTGGTCTTGTTTACAGCAATAATCTTGGACAGATAGCTCAATCTTTAGGCCACAGTTCAAGAACTTCGACCCTTGTCACGCTATATTCATCGTTCTCTTTCTTTGGCCGTTTGCTTTCAGCTACGCCAGACTACATTCGAAACAAGATCTACTTTGCGAGAACAGGATGGTTAACCATTGCACTAATACCAACACCGATTGCATTCATCTTTCTGGCTTCATCAGATAGTGCTGCGGCGCTTAATATAGGCACTGCACTAATCGGTTTGAGCTCAGGTTTCATATTTGCAGCTGCAGTGGCGGTTACATCCGAGCTATTTGGAGCTAACAGTCTTAGTGTCAATCACAACATTCTTATTACAAATATACCAATTGGATCCCTTCTCTATGGTTTTATGGCTGCATTAGTTTATGATGCTAATGCTATCTCCGCACCTGCAAACGGAAACATAATAATGTCCGATTCGTTAGTGTGCATGGGAAGACATTGCTATTTCTGGACATTTGTATGGTGGGGATGTATATCTGTCATAGGATTAGTTTCTAGTTTGCTGTTATTCTTAAGAACCAAACATGCTTATGAGTGTTTCGAGAGACACCGTATTTCAGCACAATCGACCGTGTCTTGA 1728 0.3906 MAGQSRKWMILIATIWIQAFTGTNFDFSSYSSTMKSVLKISQVQLNYLATASDLGKVFGWSSGLALMYLPISLVMFIAASMGLIGYGLQFLLINNFISLPYFLVFLLCLLSGCSICWFNTVCFVLCIKNFPVNRPLALSLTVSFNGVSAALYTLAANSINPSSDNLYLLLNALVPLLTSIAALLPILRQPPLSDTYSPHAARHNSVIFLTLNILAVFTGLYLLIFASSTSDEATSRFYFGGALILLISPLCIPGVIYARDWFHRTVHSSLRVENTGFILVHVDDLELHKELLTRQNSARNVSNGDGQSLLGENGYGIQRAKSSDVNCHKFFGQNQLEMLGEEHSAAVLVKRLDFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGHSSRTSTLVTLYSSFSFFGRLLSATPDYIRNKIYFARTGWLTIALIPTPIAFIFLASSDSAAALNIGTALIGLSSGFIFAAAVAVTSELFGANSLSVNHNILITNIPIGSLLYGFMAALVYDANAISAPANGNIIMSDSLVCMGRHCYFWTFVWWGCISVIGLVSSLLLFLRTKHAYECFERHRISAQSTVS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01079 575 SUPERFAMILY MFS general substrate transporter 5 558 IPR036259 -
Tsu05g01079 575 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 575 - -
Tsu05g01079 575 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 575 - -
Tsu05g01079 575 Pfam Nodulin-like 7 253 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01079 Tsu-Chr5 9473365 9478079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01079 1 573 Nodulin-like Gene Family AT1G31470 57.840 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01079 - - gmx:100814771 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01079 05 9473365 9478079 Tsu05g01079 05 9473365 9478079 ECH
Tsu05g01079 05 9473365 9478079 Tsu04g02760 04 32091288 32096032 PCT