Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01060 ATGTCTTGCTATATATACCTTCATTTGCTTCACCTTTTCACCTTAATCTTAATTTGTTTTGGTCCAAATAGAAGTCTGACAATGGCActaggaaaccaaactgatcaTTTGGCTTTGCTCCAATTCAAGAAACTAATATCTAATGATCCAAATGGTATCTTAGATTCTTGGAATAGTTCAACTCACTTTTGCAACTGGCTTGGAATCATATGCAGTCTCAAGCATCAGAGAGTTACAAAGTTGAAGTTGGAAGGAAACAAGTTGCATGGATCCATATCTCCATATGTTGGCAATCTCTCACATATGAGATTCCTCAACCTTGGAGATAACAAGTTCAATGGTAACATTCCACAAGAACTGGGTCGTCTGTCAAGATTAAGATATCTTCTTCTATACAACAACTCGTTGGTTGGTGAATTTCCAATAAACTTGACAAAGTGCTCAGAGCTCAAAACCATGCGCTTAGCTGGAAACAAACTGATTGGCAAAATACCTAGCCAAATTGGTTATCttcaaaagcttcaaaatttCTATATTGGAAGAAACAATTTATCTGGAAAAATCCCACCATCCATAAGGAATCTATCATCCCTTACTACTTTTTCGATCGGTTATAATAACTTGGTGGGAAATATGCCGCAAGAAATGTGTTTCCTAAAGCGATTGAAGGTTATAGGAGTGTATGCAAACAAATTGTCCGGTACATTTCCTTCTTGTCTTTATAATATATCGTCTCTTGAAATGATTTCAGCTCCAATGAATAACTTTAGTGGCTCTCTTCCACCCAATATGTTCAACACCCTCCCCAATCTCTATTTCTTTGGCATTGCCGCAAATCAATTCTCAGGTTCAATCCCTATTTCCATTATAAATGCTTCTAGTTTAACGGTATTTGATATCAGTGAAAATCATTTTGTCGGACAAGTTCCAAGTTTTAGGAAGCTAAAAAATCTTTTGGTGCTAAGTTTGTCTAAAAACAATATCGGTGGCAATTCCATCGAGGATTTGGAGTTCTTAAAATTGTTGGCAAACTGTACTAAGTTGCAAATGATCTCTTTGACCTATAATAATTTTAGAGCACGTTTGCAAACTTTTATAGGTAATTTATCCACCACACTAGAAGAATTATATATTGGGAGCAATCAAATATATGCCTTGGCTATGGAATATAACTATTTGGAAGGTATGATTCCAACTACTTTTGGAAAGTTTCCAAGGATAGAAAGGTTAGTATTGAGTGGAAACAATTTATCTGGGGATATACCGACATCCATTGGCAACCTCAGTCAACTGTATGATTTACAATTAGATGTTAATATCTTAGAAGGGCATATTCCTCCAAATATAGGAAGCTGTCAAAAGTTACAATATCTAGACCTTTCGCAAAATAACCTTAGAGGAACCATAACCTTAGAGATTTTCAGTATTCCTTCTTTATCAAATACACTGGACTTGTCACTAAACTCATTTAGTGGTAACTTGCCAAAAGAAGTGGGTATgctaaaaaatattgattggCTAGATGTCTCCGAGAATCATTTGTCTGGGGACATTCCTGAAACCATTGGTGAGTGCATAAGCTTAGAATACCTTCATTTACAAGGGAACTCCTTCAATGGAACAATACCAATCCATTTGGCTTCTCTCAAAGGTCTGCGATATTTAGACCTTTCAAGAAATCAATTGTATGGACCAATTCCTGATGTTATGCAGAATATCTCTAGCTTAGAACACTTGAATGTTTCTTTCAACATGTTGGAAGGTGAGGTACCGATTAATGGTGTATTTGGAAATGCAAGCCAAGTAGCAATTATTGGAAATAATAAGCTTTGTGGAGGTATTTCACAGCTGCATCTACCACCATGCCTTATGAAGGGTAGGAAACACGCAAAACACCATAAATTCAGGTTGATAGCAGTTATCGCCAGTGTGGGGTCTTTTCTTATCATACTTTCATTTATTGTAACTATGTATGTGATGAGGAAAAGAAATCTAAAACGACTGTTTGATTCCCCAACAATTGATCAACTAGTTAAGGTTTCATACCAAGACTTACATAGAGGAACAAATGGTTTCTCAGATAGAAACTTGATCGGATCAGGAGGTTTTGGTTCTGTGTATAGAGGAAATCTTGTACAGGAAGATAATGCTGTTGCCGTGAAGGTGCTTAACCTCCAAAATGAAGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATTAGACACCGAAATTTAGTCAAGATTTTAACATGTTGTTCTAGTACAGATTACAATGGTCAAGAATTTAAAGCTCTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAGTGGTTGCATCCCGACATTTTAAATGAAGAGAAACCAACATTGGACTTTGGTCAAAGATTAAACATCATTATCGATGTTGCTTCTGCATTACACTATCTTCATAAAGAATGTGAGCAATTGGTCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAACCATTGGTGGTAATACTAGTACAATTGGAATTAAAGGAAGTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCCGAGGTGTCCACATGTGGTGACATGTATAGCTTTGGAATTCTTATGTTGGAGATGCTTAATGGTAAAAGACCCACTGATGAAGTTTTTAAAGATGGCCAAAATCTGCATAACTTTGTTGCAATTTCATTTCCTGATAATCTTGGAAATATTTGTGACCCACATCTTGTATCAAGAGATGCAGCAATAGCAATACGAGATGGAAACAACGAGAATCCAATTCCAAGTGTAGAGGAGTGcttagtttcactttttagGATTGGACTTATTTGTTCAATGGAATCACCGATGGAAAGAATGAATATTGTGGATGTCACTAGAGAGCTTAACATAATCAGGAAGACCTTTCTCGCCGgTTTTCGCACTCATAATTAG 3006 0.3573 MSCYIYLHLLHLFTLILICFGPNRSLTMALGNQTDHLALLQFKKLISNDPNGILDSWNSSTHFCNWLGIICSLKHQRVTKLKLEGNKLHGSISPYVGNLSHMRFLNLGDNKFNGNIPQELGRLSRLRYLLLYNNSLVGEFPINLTKCSELKTMRLAGNKLIGKIPSQIGYLQKLQNFYIGRNNLSGKIPPSIRNLSSLTTFSIGYNNLVGNMPQEMCFLKRLKVIGVYANKLSGTFPSCLYNISSLEMISAPMNNFSGSLPPNMFNTLPNLYFFGIAANQFSGSIPISIINASSLTVFDISENHFVGQVPSFRKLKNLLVLSLSKNNIGGNSIEDLEFLKLLANCTKLQMISLTYNNFRARLQTFIGNLSTTLEELYIGSNQIYALAMEYNYLEGMIPTTFGKFPRIERLVLSGNNLSGDIPTSIGNLSQLYDLQLDVNILEGHIPPNIGSCQKLQYLDLSQNNLRGTITLEIFSIPSLSNTLDLSLNSFSGNLPKEVGMLKNIDWLDVSENHLSGDIPETIGECISLEYLHLQGNSFNGTIPIHLASLKGLRYLDLSRNQLYGPIPDVMQNISSLEHLNVSFNMLEGEVPINGVFGNASQVAIIGNNKLCGGISQLHLPPCLMKGRKHAKHHKFRLIAVIASVGSFLIILSFIVTMYVMRKRNLKRLFDSPTIDQLVKVSYQDLHRGTNGFSDRNLIGSGGFGSVYRGNLVQEDNAVAVKVLNLQNEGAHKSFIVECNALKNIRHRNLVKILTCCSSTDYNGQEFKALVFDYMKNGSLEQWLHPDILNEEKPTLDFGQRLNIIIDVASALHYLHKECEQLVIHCDLKPSNVLLDDDMVAHVSDFGIARLVSTIGGNTSTIGIKGSVGYAPPEYGMGSEVSTCGDMYSFGILMLEMLNGKRPTDEVFKDGQNLHNFVAISFPDNLGNICDPHLVSRDAAIAIRDGNNENPIPSVEECLVSLFRIGLICSMESPMERMNIVDVTRELNIIRKTFLAGFRTHN 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01060 1001 SUPERFAMILY L domain-like 33 328 - -
Tsu05g01060 1001 Pfam Protein kinase domain 694 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01060 1001 SUPERFAMILY Protein kinase-like (PK-like) 669 986 IPR011009 -
Tsu05g01060 1001 Gene3D Ribonuclease Inhibitor 147 218 IPR032675 -
Tsu05g01060 1001 Gene3D Ribonuclease Inhibitor 34 146 IPR032675 -
Tsu05g01060 1001 PANTHER LRR RECEPTOR-LIKE KINASE 21 996 - -
Tsu05g01060 1001 Gene3D Transferase(Phosphotransferase) domain 1 774 995 - -
Tsu05g01060 1001 CDD STKc_IRAK 698 989 - -
Tsu05g01060 1001 SUPERFAMILY L domain-like 386 612 - -
Tsu05g01060 1001 PRINTS Leucine-rich repeat signature 549 562 - -
Tsu05g01060 1001 PRINTS Leucine-rich repeat signature 455 468 - -
Tsu05g01060 1001 PANTHER OS04G0122200 PROTEIN 21 996 - -
Tsu05g01060 1001 Gene3D Ribonuclease Inhibitor 219 622 IPR032675 -
Tsu05g01060 1001 ProSiteProfiles Leucine-rich repeat profile. 317 340 IPR001611 GO:0005515
Tsu05g01060 1001 Pfam Leucine rich repeat 527 586 IPR001611 GO:0005515
Tsu05g01060 1001 SMART serkin_6 692 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01060 1001 ProSitePatterns Protein kinases ATP-binding region signature. 698 721 IPR017441 GO:0005524
Tsu05g01060 1001 Gene3D Phosphorylase Kinase; domain 1 673 773 - -
Tsu05g01060 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Tsu05g01060 1001 SMART LRR_sd22_2 315 338 - -
Tsu05g01060 1001 SMART LRR_sd22_2 370 395 - -
Tsu05g01060 1001 SMART LRR_sd22_2 171 197 - -
Tsu05g01060 1001 SMART LRR_sd22_2 549 578 - -
Tsu05g01060 1001 SMART LRR_sd22_2 219 245 - -
Tsu05g01060 1001 ProSiteProfiles Protein kinase domain profile. 692 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01060 1001 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01060 Tsu-Chr5 9306553 9321591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01060 27 999 Receptor kinase-like Gene Family AT3G47570 44.367 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu05g01060 Pkinase 9.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01060 - - mtr:MTR_5g025930 1486.09