Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01059 ATGGAAAATGGAAGTTTAGAACAATGGTTGCATCCTGAGATTTCAAATGCAGCGCCACCAAAAACATTGGACCTCGGTCATAGATTAAACATCATTATTGATGTTGCTTCTGCATTACATTATCTTCATCAAGAATGTGAACAATTGGTCATTCATTGTGATCTAAAGGCAAGCAATGTCCTTCTTGATAATGACATGATTGCTCATGTGAGTGATTTTGGCATAGCAAGATTCATCTCAGTCATTGACGGCACATCTCATAAATATACCAGTACTATTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCCACATGTGGTGACATGTATAGCTTTGGAATCCTTATGTTGGAAATGCTTACTGGTAAAAGACCCACCGCTGAAGCTTTAGAAGATGGTCAGAATCTGCATATATTTGTTGGGAATTCATTTCCTGATAATCTTATAAAAATTTTGGATCCAAATATTGTATCAAGAGATGTAGAAAACAATGAGATTCTTATTCCAAGTGCAGAGGAGTgcttaatttcactttttaagatTGGACTTGTTTGTTCAATGGAATCACTgaaagaaagaatgaatattGTGGATATCAACAGAGAGGTTATCATAATCAAAAAGGCCTTTCTCGCCGGTGAGATAAACTGA 660 0.353 MENGSLEQWLHPEISNAAPPKTLDLGHRLNIIIDVASALHYLHQECEQLVIHCDLKASNVLLDNDMIAHVSDFGIARFISVIDGTSHKYTSTIGYAPPEYGMGSEVSTCGDMYSFGILMLEMLTGKRPTAEALEDGQNLHIFVGNSFPDNLIKILDPNIVSRDVENNEILIPSAEECLISLFKIGLVCSMESLKERMNIVDINREVIIIKKAFLAGEIN 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01059 219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Tsu05g01059 219 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 216 - -
Tsu05g01059 219 SMART serkin_6 1 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01059 219 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01059 219 SUPERFAMILY Protein kinase-like (PK-like) 1 204 IPR011009 -
Tsu05g01059 219 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 216 - -
Tsu05g01059 219 Pfam Protein kinase domain 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01059 219 Gene3D Transferase(Phosphotransferase) domain 1 1 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01059 Tsu-Chr5 9302880 9303675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01059 1 214 Receptor kinase-like Gene Family AT3G47570 44.843 1.68e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu05g01059 Pkinase 8.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01059 - - mtr:MTR_5g025930 327.405