Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01051 ATGTTTCCAACATTTTCATTTTGGTTATCTCTTCTCTTTGCTCTCAACTTCATCCAAAACACAATTAGCTCTACCTTAGGTAACGAGACGGATAATTTAGCATTGCTCAAATTCAAAGAATCAATATCTAATCAACCATATGAAATATTGGCCTCTTGGAATACTTCAACTCACTTCTGCATGTGGCATGGAATCAAATGCAGTGGCATGCCACAAAGAGTTACAGAGTTAAACTTAGATGGATATAATTTGAATGGATTCATATCTCCCCATGTTGGCAATCTCTCTTTTTTGAAATATCTCAATCTTGCAAACAATAGTTTCCATGGAAAAATCCCACATGAACTCAGTCGATTGTTCCGATTGCAGAAActcttaattaataataactcCATGACAGGAGAGATTCCTACAAACTTGTCAAGTTGCTCTGATCTTCAAGTCTTATTCTTACATGGAAATCATTTGATTGGTCAAATACCAATAGGAATCAGCTCTCTTCATAAGCTTCAGAAATTGTGGATTGCAAATAACAATTTAACCGGAAGAATTCCATCATTCATAGGAAATCTTTCATCCCTAACTACTCTTGGAATGGCTAGAAATCACTTAGAGGGAAATATTCCACAAGAAATGTGCAGCCTCAAAAACTTGACAATTATGCAATTAGGTGAAAACAGACTATATGGTGCATTTCCATCTTGTCTTTATAATATGTCATCTCTTACCATAATCTCAGCAACACTCAATGAATTCAACGGATCTCTTCCATCCAATATGTTTAACACCCTCTCCAATCTTCAATATTTCATAATAGGAggaaataaattctcaggtacaATTCCTATTTCCATTGCAAATGCTTCTGCTCTAAGAGAACTCCACTTACCTGGAAACAATTTGGTCGGACAAGTTCCAAGTCTAGGAAAGTTACATGATCTTCAACTGCTAAATCTAGAAATAAACAATTTAGGTGACAATTCAActaaagatttagaatttttaaaatccTTGACCAACTGTAGTAAACTACAAATGATTTCTATATCCTATAATAATTTTGGAGGTAATTTGCCAAATTTCGTAGGAAATTTATCCACTCAACTGAGTGAACTATTTCTTGGGGGTAATCAGATATCAGGAAAACTTCCTGCAGAATTAGGAAATCTAATTGGTTTGATTCTCTTGAGTGTGGATTCAAATCACTTTGAGGGAATTATTCCTACTACTTTTGGGAAGTTTGGGAAAATGCAAGTATTAGGATTAACGGGAAATGTCTTTTCAGGAAAGGTACCAGCCATCATAGGCAACCTCAGTCAATTATATCTTTTGAGGATGAGTGATAATATGTTCGAAGGTAAAATTCCTTCAAGTATAGGAAATTGCAAAAAATTACAATACCTAGACCTTTCACAAAACAATCTTAGAGGAGCCATACCCTTAGAAATTTTAAGTCTTTCTTCATTATCAAACTTACTGAACTTGTCAAAAAACACATTGAGTGGTAGCTTACCGACAGAAGTGGGTAATCTGATAAGTATAAACAAGCTAGATGTCTCGGAGAATCATCTATCTAGTGACATTCCTAGAACAATTGGTGATTGCATAGGCTTAGAATACCTCTTTTTGCAAGGGAACTCATTCAATGGAACCATACCAACGTCGTTGGATTCACTAAAAGGTCTTCGATATTTAGACTTGTCAAGAAATCGGTTATTTGGACCAATACCTAATGTTCTACAAAATATATCAGTGTTAGAAAACTTGAATATTTCTTTCAACATGTTGGAAGGTGAGGTCCCAATAGAAGGTGTCTTTGGAAATGTGAGCAGGTTAGCAGTGACTGGAAACAGTAAGCTTTGTGGAGGTATTTCAGAGCTTCACCTACAACCATGCCCTGTTAAAGGTCTGAAACATGTAAAACACCATAAAAACAAGTGGATAATAGTGATTGTTAGTGTGGTATCTATTCTTCTCATGGTGACAattattttaactatatattggATGAAGAAAAGAAACCAGAAGCAATATTCTGATTCGCCAACAACTGACTCAATAGCCAAGGTTTCATACCAAAACCTTCACAATGGAACTGATGGGTTTTCTGCAAGCAACTTGGTTGGTTTAGGAAGTTTTGGTTCTGTGTACAAAGGTAATCTTGCATCAGAAGATAAAGTTGTTGCCATTAAGGTCCTGAACCTTCAAAAGAAAGGAGCTCATAAGAGTTTCATTGCAGAATGTAATGCACTTAAAAATATGAGACACCGGAATTTGGTTAAAATTTTGACATGTTGTTCAAGTACAGATTACAAAGGTCAAGAATTTAAGGCATTAGTGTTTGAATACATGAGCAATGGAAGCTTAGAACAATGGCTACATCCAGGGATAATGAATGCATGGAATCAAAGAATGTTGGACCTAGATCAAAGATTGAACATAACCATTGATATTGCTTCTGTATTACATTACCTTCATCATGACTGTGATCAAACGATCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGACGATGACATGGTTGCTCGTGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAGTCGTTGACGACACCTCTCACCAGGAAACTAGTACAATTGGAATTAAAGGGACTGTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAATATCCACATATGGTGACATGTATAGCTTTGGGGTGCTTATGTTGGAAATGCTTACCGCAAGAAGACCAGCAGATGAAATGTTTGAAGATGGCCAAAATCTACACATGTTTGTTGAAAATTCATTTCCTAATAATCTTATACAGATTTTGGACCCACATCTTCTACCAAGAAGCGAAGAAGCAACAATAGAAGATGGAAACATTGGGAGTTTCACTCCAATTGTAGAGAAGTGTTTAGTTTCACTTTTTCATATTGGACTTGCTTGTTCAATGGAATCACCgaaagaaagaatgaatatAGTTGATGTCACCAGAGAATTAAGCATAATAAAAAAGGCCTATCTCACCGGTGTTCACAGTCGTGATTAG 3051 0.352 MFPTFSFWLSLLFALNFIQNTISSTLGNETDNLALLKFKESISNQPYEILASWNTSTHFCMWHGIKCSGMPQRVTELNLDGYNLNGFISPHVGNLSFLKYLNLANNSFHGKIPHELSRLFRLQKLLINNNSMTGEIPTNLSSCSDLQVLFLHGNHLIGQIPIGISSLHKLQKLWIANNNLTGRIPSFIGNLSSLTTLGMARNHLEGNIPQEMCSLKNLTIMQLGENRLYGAFPSCLYNMSSLTIISATLNEFNGSLPSNMFNTLSNLQYFIIGGNKFSGTIPISIANASALRELHLPGNNLVGQVPSLGKLHDLQLLNLEINNLGDNSTKDLEFLKSLTNCSKLQMISISYNNFGGNLPNFVGNLSTQLSELFLGGNQISGKLPAELGNLIGLILLSVDSNHFEGIIPTTFGKFGKMQVLGLTGNVFSGKVPAIIGNLSQLYLLRMSDNMFEGKIPSSIGNCKKLQYLDLSQNNLRGAIPLEILSLSSLSNLLNLSKNTLSGSLPTEVGNLISINKLDVSENHLSSDIPRTIGDCIGLEYLFLQGNSFNGTIPTSLDSLKGLRYLDLSRNRLFGPIPNVLQNISVLENLNISFNMLEGEVPIEGVFGNVSRLAVTGNSKLCGGISELHLQPCPVKGLKHVKHHKNKWIIVIVSVVSILLMVTIILTIYWMKKRNQKQYSDSPTTDSIAKVSYQNLHNGTDGFSASNLVGLGSFGSVYKGNLASEDKVVAIKVLNLQKKGAHKSFIAECNALKNMRHRNLVKILTCCSSTDYKGQEFKALVFEYMSNGSLEQWLHPGIMNAWNQRMLDLDQRLNITIDIASVLHYLHHDCDQTIIHCDLKPSNVLLDDDMVARVSDFGIARLVSVVDDTSHQETSTIGIKGTVGYAPPEYGMGSEISTYGDMYSFGVLMLEMLTARRPADEMFEDGQNLHMFVENSFPNNLIQILDPHLLPRSEEATIEDGNIGSFTPIVEKCLVSLFHIGLACSMESPKERMNIVDVTRELSIIKKAYLTGVHSRD 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01051 1016 ProSiteProfiles Leucine-rich repeat profile. 464 485 IPR001611 GO:0005515
Tsu05g01051 1016 SUPERFAMILY Protein kinase-like (PK-like) 676 1002 IPR011009 -
Tsu05g01051 1016 Gene3D Ribonuclease Inhibitor 27 311 IPR032675 -
Tsu05g01051 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Tsu05g01051 1016 SUPERFAMILY L domain-like 367 622 - -
Tsu05g01051 1016 Gene3D Phosphorylase Kinase; domain 1 664 783 - -
Tsu05g01051 1016 PANTHER OS04G0122200 PROTEIN 18 1010 - -
Tsu05g01051 1016 SMART serkin_6 702 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01051 1016 PANTHER LRR RECEPTOR-LIKE KINASE 18 1010 - -
Tsu05g01051 1016 Gene3D Ribonuclease Inhibitor 324 638 IPR032675 -
Tsu05g01051 1016 Pfam Protein kinase domain 705 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01051 1016 SMART LRR_typ_2 191 215 IPR003591 -
Tsu05g01051 1016 SMART LRR_typ_2 390 413 IPR003591 -
Tsu05g01051 1016 SMART LRR_typ_2 462 486 IPR003591 -
Tsu05g01051 1016 SMART LRR_typ_2 511 535 IPR003591 -
Tsu05g01051 1016 SMART LRR_typ_2 559 582 IPR003591 -
Tsu05g01051 1016 SMART LRR_typ_2 95 119 IPR003591 -
Tsu05g01051 1016 SUPERFAMILY L domain-like 29 324 - -
Tsu05g01051 1016 ProSiteProfiles Protein kinase domain profile. 702 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01051 1016 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Tsu05g01051 1016 Pfam Leucine rich repeat 514 572 IPR001611 GO:0005515
Tsu05g01051 1016 PRINTS Leucine-rich repeat signature 465 478 - -
Tsu05g01051 1016 PRINTS Leucine-rich repeat signature 559 572 - -
Tsu05g01051 1016 ProSitePatterns Protein kinases ATP-binding region signature. 708 731 IPR017441 GO:0005524
Tsu05g01051 1016 Gene3D Transferase(Phosphotransferase) domain 1 784 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01051 Tsu-Chr5 9250996 9254332 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01051 28 1009 Receptor kinase-like Gene Family AT3G47570 44.612 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu05g01051 Pkinase 3.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01051 - - gmx:100785561 1337.78