Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01043 ATGAagcatttttctttcttgttagCTATATTTTGTTATGCATTCCTTCACCTTCTTCTCTTTACTATAACTGCAGCTTTGGCATTAAGCAATCAAACTGATCATTTAACATTGCTCCAATTCAAATATTCATTATCCAATGACCCAAATCGAGTCTTAGATTCTTGGAATAGTTCAACCCACTTTTGCAACTGGCCTGGAATTACATGTGGTCATAAGCATCAAAGAGTTACAGAGTTGAACTTGCAAGGATATGAGTTGCATGGATCCATATCTCCTCATATTGGTAATCTCTCTTTTCTAAGAACCCTCAACCTTGCAAAGAATAACTTCTTTGGAAACATTCCAAATGAACTTGGAAGGTTATTCCGATTGCAACAACTCATTCTCACCAATAACTCACTCTCAGCGGACATTCCTATAAACTTGACATATTGTTCCAATCTTGAAGGCTTGCACCTGGGAGGGAACAATTTAATTGGAAAAATCCCAATTGAAATTACCTCTCTTCATAATCTTCAAGACCTGGTTCTTCGGAATAACAAGTTAACTGGAGGTGTTCCATCATTCATAGGGAATCTTTCATCCTTAATATTCCTTGTAGTTGGTGATAACAACTTACAGGGAAATATTCCGCAAGAAATATGTCGCCTCAAAAACTTGACAGTGATAGCAATCTTTCTAAACAATTTAACTAGTACATTTCCTTCTTGTCTTTATAATATGTCATCTCTTACTGTGATCTCAGCTACAGAGAATCAGTTTAATGGCTCTCTTCCTCCTAACATGTTCACCACCCTCCCCAATCTCCAAATTTTAGAAATTAGTTGGAATCAAATAGCAGGTCCAATACCTACTTCTTTAACAAATGCTTCCTCCTTGATACATCTGGAGATTGGTAAAAACTATTTTGTCGGACAAGTTCCAAGTCTAGGAAAGCTACAAGATCTTGGGAGAATAATTTTGTCTGAAAATAATTTAGGTGAAAATTCTACTAAAGATTTGGAGTTTTTAAACTCGTTGAAAAACTGTAGTAAGCTGCTAATGGTTTCTATGGCCGTTAATAATTTTGGAGGTAGTAATTTACCAAATTCCATTGGCAATTTATCCACCCAACTTAGAAAACTATATCTTGGGGATAATATGATTTTAGGAAaaattcccgtggaaataggcAATCTAGTTGGTTTAACCCTCTTGACCATGGAACAAAACCAATTTGATGGAATTATTCCAACTACTTTTGGTATGTTTGAAAAGATGCAATTGTTAAAGTTGAGTGAAAACAAGTTGTCTGGAGATATACCGCCCTTTATAGGCAATTTCAAACAATTGTTTCATTTAGAATTACATTTTAATATGTTTCACGGAATTATTCCTCCAAGTATAGGAAACTGTCAAAAGTTACAATATCTAGATCTTTCTCATAATAAGCTCGGAGGAACCATACCTTCAGAGCTTTTTAACCTTTTTGCTTTATCAAACTTATTGAACTTGTCACACAATTCTTTAAAGGGTAGCTTACCAGGAGAAGTGggtatgttaaaaaatattgataagcAAGATGTCTCTGAGAATCATTTATCTGGTGATATTCCTAGAGCAATTGGTGAATGTCTAAGCTTAGAATACCTTCTTTTGCAAGGTAACTCCTTTAACGGAACAATACCGTCCTCTTTGGCTTCTCTCAAAGGTCtccaatatttagacctttcaAGAAATCAATTGTCTGGATCAATTCCTTATGTTATGCAAAATTActcttttttaaaacatttgaatgTTTCTTTTAACATGTTGGAAGGTGAGGTACCGACACGTGGTGTCTTTGGGAATATAACCCATGTAGAAATTATTGAGAACAAAAAGCTTTGTGGAGGTATTTCACAACTGCATCTACCACCATGCCCTATCAAGGGtataaaacacacaaaacacCACAAATTCAGGTTGATAGCAATGATAGTTAGTGtggtttcttttcttctcatacTTTCCTTTATTATAACTATGTACCGGATgaggaaaagaaataaaaaacgatctTTTGATTCACCAACAATTGATCAACTAGCTAAGGTTTCATACCAAGAATTGCATCAAGGAACCGATGGGTTCTCGCCTACAAACTTGATCGGATCAGGAAATTTTGGTTCTGTGTACAAAGCAAATCTTGAGTCAGAAGATCATGTTGTTGCCATAAAGGTTCTGAACCTCCAAAAAAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATTAGACACCGTAATTTAGTTAAGATTTTAACTTGTTGTTCGAGTACAGATTACAAAGGTCAAGAATTCAAAGCTCTAGTTTTCGATTACATGAAAAATGGAAGTTTAGAACAATGGTTGCATCCCGAGATTTTAAATGAAGAGAATCCAACAACATTGAGCCTTGGTCAAAGATTAAACATAATTATCGATGTTGCTGATGCATTACATTATCTCCATTTAGAATGTCAGCAATTGGTCCTTCATTGTGATCTAAAGTCAAGCAATGTCCTTCTTGATATTGACATGGTTGCTCATGTGAGTGATTTTGGAATAGCAAGACTTGTCTTATCCATTGGTGGTAGCTCTCAGAAGGATACTAGTTCAATTGGAATTAAAGGGACTGTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTTTCCACATGTGGTGACATGTATAGCTTTGGAATCCTCGTGTTGGAAATGCTTACCGGTAGACGACCTACTGATGAAGTTTTTGAAGAAGGTCAAAATCTGCATAACTTTGTTGCAATCTCCTTTCCCGATGACCTTATGAAGATTTTAGACCCACGTCTTGTATCAAGAGATATAGAAGTAGCAATACAAGAAGGAAATCATGTCACTGGAGAGCTTAGCAAAATCAAAAAGGCATTTTTCACCGGTGTTCACGCTCATAACTAG 2961 0.3408 MKHFSFLLAIFCYAFLHLLLFTITAALALSNQTDHLTLLQFKYSLSNDPNRVLDSWNSSTHFCNWPGITCGHKHQRVTELNLQGYELHGSISPHIGNLSFLRTLNLAKNNFFGNIPNELGRLFRLQQLILTNNSLSADIPINLTYCSNLEGLHLGGNNLIGKIPIEITSLHNLQDLVLRNNKLTGGVPSFIGNLSSLIFLVVGDNNLQGNIPQEICRLKNLTVIAIFLNNLTSTFPSCLYNMSSLTVISATENQFNGSLPPNMFTTLPNLQILEISWNQIAGPIPTSLTNASSLIHLEIGKNYFVGQVPSLGKLQDLGRIILSENNLGENSTKDLEFLNSLKNCSKLLMVSMAVNNFGGSNLPNSIGNLSTQLRKLYLGDNMILGKIPVEIGNLVGLTLLTMEQNQFDGIIPTTFGMFEKMQLLKLSENKLSGDIPPFIGNFKQLFHLELHFNMFHGIIPPSIGNCQKLQYLDLSHNKLGGTIPSELFNLFALSNLLNLSHNSLKGSLPGEVGMLKNIDKQDVSENHLSGDIPRAIGECLSLEYLLLQGNSFNGTIPSSLASLKGLQYLDLSRNQLSGSIPYVMQNYSFLKHLNVSFNMLEGEVPTRGVFGNITHVEIIENKKLCGGISQLHLPPCPIKGIKHTKHHKFRLIAMIVSVVSFLLILSFIITMYRMRKRNKKRSFDSPTIDQLAKVSYQELHQGTDGFSPTNLIGSGNFGSVYKANLESEDHVVAIKVLNLQKKGAHKSFIVECNALKNIRHRNLVKILTCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPEILNEENPTTLSLGQRLNIIIDVADALHYLHLECQQLVLHCDLKSSNVLLDIDMVAHVSDFGIARLVLSIGGSSQKDTSSIGIKGTVGYAPPEYGMGSEVSTCGDMYSFGILVLEMLTGRRPTDEVFEEGQNLHNFVAISFPDDLMKILDPRLVSRDIEVAIQEGNHVTGELSKIKKAFFTGVHAHN 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01043 986 ProSiteProfiles Leucine-rich repeat profile. 468 490 IPR001611 GO:0005515
Tsu05g01043 986 SUPERFAMILY Protein kinase-like (PK-like) 681 930 IPR011009 -
Tsu05g01043 986 Gene3D Phosphorylase Kinase; domain 1 687 787 - -
Tsu05g01043 986 PRINTS Leucine-rich repeat signature 469 482 - -
Tsu05g01043 986 PRINTS Leucine-rich repeat signature 563 576 - -
Tsu05g01043 986 SUPERFAMILY L domain-like 32 327 - -
Tsu05g01043 986 Pfam Leucine rich repeat 541 600 IPR001611 GO:0005515
Tsu05g01043 986 Pfam Leucine rich repeat 220 280 IPR001611 GO:0005515
Tsu05g01043 986 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Tsu05g01043 986 Gene3D Ribonuclease Inhibitor 341 644 IPR032675 -
Tsu05g01043 986 Gene3D Ribonuclease Inhibitor 145 214 IPR032675 -
Tsu05g01043 986 Gene3D Ribonuclease Inhibitor 34 144 IPR032675 -
Tsu05g01043 986 ProSiteProfiles Protein kinase domain profile. 706 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01043 986 Gene3D Ribonuclease Inhibitor 215 340 IPR032675 -
Tsu05g01043 986 PANTHER LRR RECEPTOR-LIKE KINASE 21 960 - -
Tsu05g01043 986 SMART serkin_6 706 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01043 986 SUPERFAMILY L domain-like 371 626 - -
Tsu05g01043 986 ProSitePatterns Protein kinases ATP-binding region signature. 712 735 IPR017441 GO:0005524
Tsu05g01043 986 SMART LRR_typ_2 98 122 IPR003591 -
Tsu05g01043 986 SMART LRR_typ_2 563 586 IPR003591 -
Tsu05g01043 986 SMART LRR_typ_2 466 490 IPR003591 -
Tsu05g01043 986 SMART LRR_typ_2 194 218 IPR003591 -
Tsu05g01043 986 SMART LRR_typ_2 170 193 IPR003591 -
Tsu05g01043 986 SMART LRR_typ_2 267 291 IPR003591 -
Tsu05g01043 986 SMART LRR_typ_2 394 417 IPR003591 -
Tsu05g01043 986 SMART LRR_typ_2 242 266 IPR003591 -
Tsu05g01043 986 Pfam Protein kinase domain 709 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01043 986 Pfam Leucine Rich Repeat 468 489 IPR001611 GO:0005515
Tsu05g01043 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Tsu05g01043 986 Gene3D Transferase(Phosphotransferase) domain 1 788 974 - -
Tsu05g01043 986 PANTHER OS04G0122200 PROTEIN 21 960 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01043 Tsu-Chr5 9085930 9095160 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01043 28 960 Receptor kinase-like Gene Family AT3G47570 46.186 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu05g01043 Pkinase 2.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01043 - - mtr:MTR_5g025930 1255.35