Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01038 ATGTGGCAGGGAGTGACATGCAACCCCATGCATAAAAGGGTTATAGAATTGAACCTAGGAGGATATCATTTACATGGATCTTTGTCTCCCCATGTTGGTAATCTTTCTTTTCTGATAAATCTCAATCTTAGAAACAACAGTTTCCTTGGAGAAATTCCACCAGAATTGGGCCGGTTGCTACAATTGCAACAACTTTTTCTTGACATTAACTTTTTTTCAGGTGAAATTCCTAGAAACTTGACATATTGTTCAAATCTCACAGACTTGTATTTGGGAGGGAATAATCTAGTTGGCAAAATACCAATGGAAATTGGCTCTTTGAATAAGCTTCAATCAATGGCCATTTATAGAAACAATTTAACCGGAGGAATCCCTACATCCATAGGGAATCTTTCACGATTAATGCGTTTTACGTGTGCTGAAAACAACATAGAAGGAGATATTCCACGAGAAATTTGTCGCCTAAAAAACTTGACATATTTAGCTATGGGTGAGAACAAATTGTCTGGTAACACTCCTTATTGTCTTTACAACATCACATCACTTATTACACTTTCCATGACAGAGAATATCTTTCATGGTCCTCTTCCATTAAACATGTTCCACACCCTCCCTAATctcaaaacttttgaaattggTGGGAATAAATTTTCAGGTCCAATCCCCACTTCATTAAATTCGTCTTCTTCCGTTACATTATTTGATATCAGTGGAAACTATTTTGTTGGACAAGTTCCACTTTTAGGAAGGCTAAAAGATTTATATGCTCTAAATTTGGAACAAAACAATTTAGGTAACAATTCAAATAAGGATTTGGAGTTTTTAGAATCTTTGACAAACTGTAGTAAATTAAACGGGGTTTCTATTTCCACGAATAATTTTGGAGGCACTCTGCCGCATTCTATAGGAAATTTATCTACTGGGCTTACAAGATTATATCTTGGTAGTAATACAATATCAGGAAAAGTTCCTACAGAATTAGGACGTTTAGTTGGCTTAATTATCTTGGTCATGGATTATAACTACTTTGAAGGAATTATTCCACCTACTTTTGGAAAGTTCCAAAAGTTGCAAGTGTTAACTTTGAATGGAAACAAATTGTCAGGAGATATACCACCATTTATAGGGAATCTCAGTCAATTGTTTGCATTGGAATTAAAACTTAATATGTTTCAAGGAGATATTCCTCGAAGCATAGGAAACTGCAAACAGTTACAGATTCTAGAACTTTCGCATAATAAGCTTACAGGGACCATACCTATAGAGGTTTTTAGTCTTTCTTCTTTAACAAACTTACTGAATTTGTCACATAACTCTTTGAGTGGTAACTTACCAAGAGAAGTAGGTATGCTAAAAAATGTTGATTGGCTAGATGTCTCTGAGAATCATTTGTCTGGGGACATTCCTGAAACTATTGGTGAATGCACAAGCTTAGAATACCTTCAGTTGCAAGGGAATTCCTTCAACGGAACAATACCGTCCTCTTTGGCTTCTCACAAAGGTCTGCGATATTTAGACCTTTCAAGAAATCAATTGTACGGACCAATTCCTGATGTCATGCAAAATATCTCTACCTTAGAGTATTTAAATGTTTCTTTTAACATGTTGGAAGGTGAGGTCCCAACAAATGGTGTCTTTGGAAATGCAACCCGAGTAGCAATGATTGGAAACAATAAACTTTGTGGAGGAATTTCACAGTTGCATCTACCACCATGCCCTATCAAGGCTAAGATTTCATACCAAGACCTACATCAAGGAACCGATGGGTTTTCGAGTAGAAACTTAATCGGATCAGGAAATTTTGGTTCTGTGTACAAAGGAAATCTTGTGTCAGAAGATAATGTTGTTGCTGTAAAAGTCCTGAACCTCCAAAAGAAGGGAGCACACAAGAGTTTCATTGTTGAATGTAATGCACTCAAGAATATTAGACATCGAAATTTAGTTAAGATTTTAACATGTTGTTCTAGTACAGATTACAAAGAATGTGAGCAATTGGTCATTCACTGTGATCTAAAGCCAAGCAATGTCCTTCTGGATGATGACATGGTTGCTCATGTTAGTGATTTTGGCATAGCTAGACTTGTCTCAGCCATTGGCGGTACTTCTCATAAGAATACGAGTACAATTGGAATAAAAGGAACTGTTGGCTATGCTCCTCCAgAGTATGGGATGGGTTCTGAAGTGTCCACATGTGGTGACATGTATAGCTTTGGAATCCTTATGTTGGAAATTCTTACCAGTAAAAGACCCACTGACGAAGCTTTCAAAGATGGTCAAAATCTACATAACTTTGTTGAAATTTCATTTCCTGACAATCTTATGAAGATTTTGGACCCACATCTTGTATCAAGAGATGCAAAAGTAGCACTGCAAGATGGAAATGGTGTGGATCTTAATCCAACTGTTGAGGAGTGcttagtttcactttttagGATTGGACTTATTTGTTCAATGGAATCACCgaaagaaagaatgaatattGCGGATGTCACTAGAGAGCTTAGCATAATCAAAAAGGCCTTTCTCTCCGGAGTTCACTCTCATAATTAG 2550 0.3604 MWQGVTCNPMHKRVIELNLGGYHLHGSLSPHVGNLSFLINLNLRNNSFLGEIPPELGRLLQLQQLFLDINFFSGEIPRNLTYCSNLTDLYLGGNNLVGKIPMEIGSLNKLQSMAIYRNNLTGGIPTSIGNLSRLMRFTCAENNIEGDIPREICRLKNLTYLAMGENKLSGNTPYCLYNITSLITLSMTENIFHGPLPLNMFHTLPNLKTFEIGGNKFSGPIPTSLNSSSSVTLFDISGNYFVGQVPLLGRLKDLYALNLEQNNLGNNSNKDLEFLESLTNCSKLNGVSISTNNFGGTLPHSIGNLSTGLTRLYLGSNTISGKVPTELGRLVGLIILVMDYNYFEGIIPPTFGKFQKLQVLTLNGNKLSGDIPPFIGNLSQLFALELKLNMFQGDIPRSIGNCKQLQILELSHNKLTGTIPIEVFSLSSLTNLLNLSHNSLSGNLPREVGMLKNVDWLDVSENHLSGDIPETIGECTSLEYLQLQGNSFNGTIPSSLASHKGLRYLDLSRNQLYGPIPDVMQNISTLEYLNVSFNMLEGEVPTNGVFGNATRVAMIGNNKLCGGISQLHLPPCPIKAKISYQDLHQGTDGFSSRNLIGSGNFGSVYKGNLVSEDNVVAVKVLNLQKKGAHKSFIVECNALKNIRHRNLVKILTCCSSTDYKECEQLVIHCDLKPSNVLLDDDMVAHVSDFGIARLVSAIGGTSHKNTSTIGIKGTVGYAPPEYGMGSEVSTCGDMYSFGILMLEILTSKRPTDEAFKDGQNLHNFVEISFPDNLMKILDPHLVSRDAKVALQDGNGVDLNPTVEECLVSLFRIGLICSMESPKERMNIADVTRELSIIKKAFLSGVHSHN 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01038 849 PANTHER LRR RECEPTOR-LIKE KINASE 576 661 - -
Tsu05g01038 849 PANTHER LRR RECEPTOR-LIKE KINASE 661 844 - -
Tsu05g01038 849 PANTHER LRR RECEPTOR-LIKE KINASE 2 577 - -
Tsu05g01038 849 Pfam Protein kinase domain 664 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01038 849 Pfam Protein kinase domain 592 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01038 849 SUPERFAMILY L domain-like 280 562 - -
Tsu05g01038 849 SMART serkin_6 590 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01038 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Tsu05g01038 849 ProSitePatterns Protein kinases ATP-binding region signature. 596 619 IPR017441 GO:0005524
Tsu05g01038 849 PANTHER OS04G0122200 PROTEIN 661 844 - -
Tsu05g01038 849 Gene3D Ribonuclease Inhibitor 1 127 IPR032675 -
Tsu05g01038 849 Gene3D Phosphorylase Kinase; domain 1 574 663 - -
Tsu05g01038 849 Gene3D Transferase(Phosphotransferase) domain 1 664 848 - -
Tsu05g01038 849 Pfam Leucine rich repeat 477 536 IPR001611 GO:0005515
Tsu05g01038 849 Pfam Leucine rich repeat 356 415 IPR001611 GO:0005515
Tsu05g01038 849 SUPERFAMILY L domain-like 2 264 - -
Tsu05g01038 849 Gene3D Ribonuclease Inhibitor 132 201 IPR032675 -
Tsu05g01038 849 ProSiteProfiles Protein kinase domain profile. 590 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01038 849 PANTHER OS04G0122200 PROTEIN 576 661 - -
Tsu05g01038 849 PANTHER OS04G0122200 PROTEIN 2 577 - -
Tsu05g01038 849 Gene3D Ribonuclease Inhibitor 202 573 IPR032675 -
Tsu05g01038 849 SUPERFAMILY Protein kinase-like (PK-like) 573 835 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01038 Tsu-Chr5 9037780 9041146 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01038 2 842 Receptor kinase-like Gene Family AT3G47090 39.770 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu05g01038 Pkinase 6.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01038 - - mtr:MTR_5g025930 1060.44