Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01036 ATGCATATGCAATTATGCATGTTTCCTCTCTCTATTCCCCCAAAACTAGATAGCATAAACACCTACTTCTTTCTTCTAAATCAAATGAAGTCTTTTACTTTCTTGTCACCTACACTTTTATACCTTCATCTGCTTTTTCTGTTTACCTTCAATTTAATGTGGTTTAATCGAAACAAAACTGTGGCAGTTGCTGCAATATTAGGAAACCAAACAGATCATTTGACATTGCTCAAATTCAAAGAATCAATATCCAGTGATCCATATAAAACTCTTGAATCTTGGAATTCTTCCATCCACTTCTGCAAGTGGCGTGGAATCACATGCAACCCGATGAATCAAAGAGTTATAGGTTTGAACTTAGGAGGATATCAGGTACATGGATCTTTATCTCCCTATATTGGTAATCTCACTTTTCTGAAAAATCTCACCCTTCAAAACAACAGCTTCTATGGAGAAATCCCACAAGAGTTGGGTCAGTTGCTACAATTGCAAAAACTTCATCTCTCCAATAACTCTTTTGTAGGTAAAATACCTACAAACTTGACACATTGCTCCAATCTCGAATACTTATTCTTGAATAGGAACAATCTTATTGGTaaaataccaattgaaattggCTCTTTGAAAAAGCTTAAACAAATGACtgtttataaaaacaaattaactgGAGGAATCCCTTCATCCGTAGGGAATCTTTCAAGCGCAACACATTTTATGGTTGGTCTTAACAACTTAGAAGGAGATATTCCACAAGAAATTTGTCACCTCAAAAACTTGACATATTTAGTTGTGAGTGAGAACAATATGTCTGGTATCCCTCCTCCTTGTCTTTACAACATCACATCACTTACTACATTTTACATGGCATTTAATAACTTTCACGGTCCTCTTCCACCCAACATGTTTCACAACCTCCCAAATATCCAAGAGTTTGGCATTTCAGGAAATCAATTTTCAGGCCTAATCCCCACTTCTATAAATTCATCTTCGTCCATTAATTATCTTGATATCTCagataataattttgttggACAAGTTCCAAGTTTAGGAAAGCTAAAAGATTTAAACCATCTAAATTTGGAAATCAACAATTTAGGTAACAATTCAGCTAAGGATTtagagtttttaaaatctttgtCAAACTGTAGTAAATTGAATGTGTTTTCTATTTACAATAATTATTTTGGTGGCATTCTTCCAAATTCTATAGGGAATTTATCTACTGAGCTTAAATTACTATATCTTGATGATAATATGATATCAGGAAAAATTCCTGATGAACTAGGACGTCTAGTTGGCTTAATATCATTGTCCTTAGAATCAAATCAGTTTGAAGGAATTATTCCAACTACTTTTGAAAAGTTGCAGAAATTGCAAATGTTACGTTTGAGTATCAACAAGTTGTCAGGAAATATACCACACTTTATATGTAATCTCAGTCAATTGTATTTTTTGGATTTATATTATAACATGTTTCACGGAAATATTCCTTCTAGCATAGGAAACTGTCAAAAGTTACAATTTCTAGATCTTTCGCAGAATAAGCTTAGAGGAACCGTACCTTTAGAggtttttaatcttttttctttaacaACCCGCCTAGACTTGTCAGGTAACTCTTTGAGCGGTAGCTTAccaagagaagtgggtatgctaaaacatattttttggtTAGATGTCTCTGAGAACCATTTGTCTGGGGACATTCCTGAAACTATTGGTGAATGCATAAGCTTAGAGCACCTCAGCTTACAAGGGAACTATTTCAACGGAACCATACCATCATCTTTAGTATCTCTCAATGGTCTTGGATATTTAGACCTTTCCAGAAATAAATTGTACGGACAAATTCCTGATGTTATGCAAAATATCTCTAGCTTAGAATACTTGAATGTTTCGTTCAACATGTTGGAAGGTGAGGTGCCGACAAATGGTGTATTTGGAAATGCAACCCAAGTAGCAATTATTGGAAACAATAAGCTTTGTGGAGGTATTGCACAACTGCATCTACCACCATGCCATATCGAGGGcagaaaacacacaaaacacCATAAATTCAGGTTGATAATAGTGATAGTTAGTGTGGTTTCTTTTCTGCTCATTCTTTCATTTATTATAACTATCTATTGGATGAGGAAAAGAATTCAAAAACGATCTTTTGATTCGCCAATAATTGATCAACTAACTAAGGTTTCATATCAAGCCTTACATCGAGGAACCGATGGGTTCTCAACTAGAAACTTGATCGGATCAGGAAGTTTTGGTTCTGTGTACAAAGCAAATCTTGAGTCGGAAGACCATTTTGTTGCCGTAAAGGTCTTGAACCTCCAAAAGAAGGGAGCTCACAAGAGTTTCATCATTGAATGTAATGCACTCAAGAATGTTAGACACCGAAATTTAGTTAAGATTTTAACATGTTGCTCTAGTACAGATTACAAAGGTCAAGAATTTAAAGCTTTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCAGATATTCTAAATGCAAAGCCTTCAACAACATTGGACCTTAGTCATAGAATAAACATTATTGTTGATATTGCTTCTGCATTGCATTATCTTCATATAGAATGTGAGCAATTGGTCCTTCATTGTGATCTAAAGCCAAGCAATGCCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGCATATCAAGACTCATCTCGGCCATTGACGGAACCTCTCAAAAGGATAACAGTACAATTGTAATAAAAGGGACTGTTGGCTATGCTCCTCCAGAATATGGAATGGGTTCTGAAGTGTCAACATGTGGTGACATGTATAGCTTTGGAATCTTGGTACTAGAAATGCTTACCGGTAGAAGACCTACCGATGAAATGTTTGAAGATGGTCAAAATCTGCATAACTTTGTTTCGATTTCATTTCCTGATAATCTTATAAAGGTTTTGGACCCACATCTTGTATCAAGAGATGCAAAAGTAGTAATAGAAGATGGAAACAATGAGAATCTTATTCTAAGTGTAGAGGAGTGGTTAGTTTCACTTTTTAAGATTGGACTTGCTTGTTCAATAGAATCACCGAAAGAAAGATTGAATATTGTGGATGTTAATAGAGAGCTTAGCAAAATTAGAACGGTCTTTCTTGCCGGTGAGATAAACTga 3168 0.3374 MHMQLCMFPLSIPPKLDSINTYFFLLNQMKSFTFLSPTLLYLHLLFLFTFNLMWFNRNKTVAVAAILGNQTDHLTLLKFKESISSDPYKTLESWNSSIHFCKWRGITCNPMNQRVIGLNLGGYQVHGSLSPYIGNLTFLKNLTLQNNSFYGEIPQELGQLLQLQKLHLSNNSFVGKIPTNLTHCSNLEYLFLNRNNLIGKIPIEIGSLKKLKQMTVYKNKLTGGIPSSVGNLSSATHFMVGLNNLEGDIPQEICHLKNLTYLVVSENNMSGIPPPCLYNITSLTTFYMAFNNFHGPLPPNMFHNLPNIQEFGISGNQFSGLIPTSINSSSSINYLDISDNNFVGQVPSLGKLKDLNHLNLEINNLGNNSAKDLEFLKSLSNCSKLNVFSIYNNYFGGILPNSIGNLSTELKLLYLDDNMISGKIPDELGRLVGLISLSLESNQFEGIIPTTFEKLQKLQMLRLSINKLSGNIPHFICNLSQLYFLDLYYNMFHGNIPSSIGNCQKLQFLDLSQNKLRGTVPLEVFNLFSLTTRLDLSGNSLSGSLPREVGMLKHIFWLDVSENHLSGDIPETIGECISLEHLSLQGNYFNGTIPSSLVSLNGLGYLDLSRNKLYGQIPDVMQNISSLEYLNVSFNMLEGEVPTNGVFGNATQVAIIGNNKLCGGIAQLHLPPCHIEGRKHTKHHKFRLIIVIVSVVSFLLILSFIITIYWMRKRIQKRSFDSPIIDQLTKVSYQALHRGTDGFSTRNLIGSGSFGSVYKANLESEDHFVAVKVLNLQKKGAHKSFIIECNALKNVRHRNLVKILTCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPDILNAKPSTTLDLSHRINIIVDIASALHYLHIECEQLVLHCDLKPSNALLDDDMVAHVSDFGISRLISAIDGTSQKDNSTIVIKGTVGYAPPEYGMGSEVSTCGDMYSFGILVLEMLTGRRPTDEMFEDGQNLHNFVSISFPDNLIKVLDPHLVSRDAKVVIEDGNNENLILSVEEWLVSLFKIGLACSIESPKERLNIVDVNRELSKIRTVFLAGEIN 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01036 1055 SMART serkin_6 743 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01036 1055 Gene3D Ribonuclease Inhibitor 236 301 IPR032675 -
Tsu05g01036 1055 Gene3D Ribonuclease Inhibitor 180 235 IPR032675 -
Tsu05g01036 1055 Gene3D Ribonuclease Inhibitor 302 351 IPR032675 -
Tsu05g01036 1055 Gene3D Ribonuclease Inhibitor 72 179 IPR032675 -
Tsu05g01036 1055 SUPERFAMILY L domain-like 71 365 - -
Tsu05g01036 1055 SUPERFAMILY L domain-like 410 663 - -
Tsu05g01036 1055 PANTHER LRR RECEPTOR-LIKE KINASE 57 1051 - -
Tsu05g01036 1055 SUPERFAMILY Protein kinase-like (PK-like) 719 1042 IPR011009 -
Tsu05g01036 1055 Gene3D Ribonuclease Inhibitor 365 682 IPR032675 -
Tsu05g01036 1055 SMART LRR_typ_2 527 552 IPR003591 -
Tsu05g01036 1055 SMART LRR_typ_2 600 623 IPR003591 -
Tsu05g01036 1055 SMART LRR_typ_2 256 279 IPR003591 -
Tsu05g01036 1055 SMART LRR_typ_2 624 649 IPR003591 -
Tsu05g01036 1055 SMART LRR_typ_2 431 454 IPR003591 -
Tsu05g01036 1055 SMART LRR_typ_2 280 304 IPR003591 -
Tsu05g01036 1055 SMART LRR_typ_2 160 184 IPR003591 -
Tsu05g01036 1055 SMART LRR_typ_2 455 479 IPR003591 -
Tsu05g01036 1055 Gene3D Phosphorylase Kinase; domain 1 724 824 - -
Tsu05g01036 1055 PANTHER OS04G0122200 PROTEIN 57 1051 - -
Tsu05g01036 1055 ProSitePatterns Protein kinases ATP-binding region signature. 749 772 IPR017441 GO:0005524
Tsu05g01036 1055 ProSiteProfiles Protein kinase domain profile. 743 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01036 1055 Pfam Leucine rich repeat 578 637 IPR001611 GO:0005515
Tsu05g01036 1055 Pfam Leucine rich repeat 434 491 IPR001611 GO:0005515
Tsu05g01036 1055 Gene3D Transferase(Phosphotransferase) domain 1 825 1050 - -
Tsu05g01036 1055 Pfam Protein kinase domain 745 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01036 1055 Pfam Leucine rich repeat N-terminal domain 70 109 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01036 Tsu-Chr5 9031611 9034964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01036 69 1049 Receptor kinase-like Gene Family AT3G47570 45.464 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu05g01036 Pkinase 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01036 - - mtr:MTR_5g025930 1292.33