Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01019 atggAACTAAATATCATGTTATGTTTTTTCACTTCAATTCTCTTCattgttttgttcaaaaaattcatcaaacctTATGTCTCAAAAAGACAATACTTACCACTTCCACCTGGTTCCATGGGTTGGCCTTACATAGGAGAAACTTTTCAACTATATTCTCAAGACCCAAATGTCTTTTTTGCATCAAAAATTAAAAGgTATGGTTCTATGTTCAAGTCACACATTTTAGGGTGTCCTTGTGTGATGATTTCAAGTCCTGAAGCTGCTAAATTTGTGTTGAATAAAGCTCAACTTTTTAAGCCAACATTTCCAGCTAGTAAAGAGAGGATGTTGGGAAAACAAGCTATATTTTTTCATCAAGGAGAGTATCATGCTAACTTAAGAAGACTCGTTCTTCGTACTTTCATGCCGGAAGCCATCAAAAACATTGTTCCTGACATTGAATCCATTGCTGAAGATAGTCTTAAATCAATGGAAGGAGGATTAATCACCACTTTCCTTGAAATGAAAACGTTCACATTCAATGTTGCTCTGCTTTCTATTTTTGGAAAAGATGAAATTCATTACAGAGAAAGATTGAAACAGTGTTACTACACACTTGAGAAAGGTTACAATTCAATGCCAATTAACATTCCTGGAACACTCTTTCACAAAGCAATGAAAGCAAGGAAAGAACTTGCACAGATCTTAGCTCAAATAATCTCAAGTagaagagaaaagaaacaagaatacaAAGATTTGTTAGGTTCATTCATGGATGAAAAATCAGGACTAAGTGATGAACAAATAGCAGATAATGTAATTGGAGTTATATTTGCAGCTCGTGATACCACAGCTAGTGTGCTGACGTGGACTGTTAAATACCTTGGTGAAAATATCAATGTCCTAGAAGCAGTGATTGAGGAACAAGAATCTATATTGAAGAGTAAGGAAGAAAATGGTGAAGAAAAAGGTCTTAAATGGGAAGATACAAAGAAAATGGTTATAACTTCAAGGGTTATTCAAGAAACTCTTAGAGTTGCTTCAATTTTGTCTTTCACTTTTAGAGAAGCAGTTGAAGATGTTGAATATCAAGggtATCTTATACCAAAAGGGTGGAAAGTATTGCCACTTTTTAGGAATATACACCATAGTCCAAACAACTTTAAAGATCCAGAAAAATTTGATCCTTCAAGATTTGAGGTAATTACTATTTACCATAGTTTTGTTCTGTTCCTATTGATGTTTTGA 1230 0.3244 MELNIMLCFFTSILFIVLFKKFIKPYVSKRQYLPLPPGSMGWPYIGETFQLYSQDPNVFFASKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGEYHANLRRLVLRTFMPEAIKNIVPDIESIAEDSLKSMEGGLITTFLEMKTFTFNVALLSIFGKDEIHYRERLKQCYYTLEKGYNSMPINIPGTLFHKAMKARKELAQILAQIISSRREKKQEYKDLLGSFMDEKSGLSDEQIADNVIGVIFAARDTTASVLTWTVKYLGENINVLEAVIEEQESILKSKEENGEEKGLKWEDTKKMVITSRVIQETLRVASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHSPNNFKDPEKFDPSRFEVITIYHSFVLFLLMF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01019 409 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01019 409 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01019 409 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01019 409 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01019 409 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01019 409 Coils Coil 293 313 - -
Tsu05g01019 409 PANTHER CYTOCHROME P450 26 12 400 - -
Tsu05g01019 409 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 12 400 - -
Tsu05g01019 409 SUPERFAMILY Cytochrome P450 29 394 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01019 409 Pfam Cytochrome P450 36 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g01019 409 Gene3D Cytochrome P450 26 402 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01019 Tsu-Chr5 8827347 8830129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01019 12 405 Cytochrome P450 AT4G19230 72.772 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01019 K09843 - gmx:100170674 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01019 05 8827347 8830129 Tsu05g01019 05 8827347 8830129 ECH
Tsu05g01019 05 8827347 8830129 Tsu04g02735 04 31449714 31453014 PCT