Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00986 ATGATTTTCGATACGCCACCATCGGGCGCTCAAAGTGTGAGGACAAACAGAACTTCATTTGGTTCTAGCATTGGCAATGGGAGTACTCCACTACATAGCTATGCTACTGTTAGCAATGGCGATGACTATGACAGCGATGGATCAAATTTCGCACCACCCACACCAACAGTTCTACCAATGGCTATTCCAGCAGAGCTCGCTGGAGCTGGACCTTTGATTGACAGATTCCAGGTGGAAGGTTTTTTAAAGTTGATGCAAAAACAAATTCACTCTGGCGGTAAGCGAGGATTTTTTTCTAAACGATCTGTGGGACCCCAAGTTCGAGAGAAACTTACAATTGAAGACATGCTTTGCTTCCAAAAGGATCCGATACCAACATCATTGCTTAAGTTGAATGGTGATTTGGCAAGCCGGGCAACAAAGATGTtccaaatgattttaaaatatatcggTGTTGATTCGTCTTCACTAAGCTTAGAGGATCGGGTTGAGCTTGTAAGTAAACTATACAAGCAAAGTTTGAAGCATTCAGAGCTCAGGGATGAACTTTTTGTCCAGCtatcaaaacaaacaagaaaCAACCCAGAGAGGGAATACTTGAACAAGTCATGGGAGCTAATGTATTTATGTGCGTCGTGCATGCCTCCTAGCAAAGACATTGGAGGATATCTGTCAGAATATATCCATAATGTAGCGCATGGTGCGACTGTTGATCCTGGGATCCGAGAAGTTGCATTAAATACTTTAAATGCTTTGAAGCACTCTCTCAAGGCGGGTCCTAGGCACATAATACCTGGGCCTATGGAGATTGAAGCTCGGATTACTCGGAAAAAGCTCACAACTGTAGTCTTCTTTCTGGATGAAACATTTGAAGAAATTACATATGACATGGCAACAACTGTCGCGGACGCTGTCGAGGAGCTTGCAGGGATCATTAAACTGTCAACATACTCTAGCTTTGGCTTGTATGAATGCCGCAAAGTTGTCACCAGCTCCAAATCAGCTGATTCTGGAAATGAGGAGTACATTGGATTGGATGATAACAAACATATCGGCGATCTACTGGCTGAATTTAAGGCAGTAAAAGATCGAAGTAAGGGAGAAATTTTGCACTGCAAACTGGTATTCAAGAAAAAGTTATTTCGCGAATCAGATGAAGGTGTGACAGATCCAATGTTTTGGCAGTTGTCCTATGTGCAGTTGCAGCATGATTATATTTTGGGTAACTATCCTATTGGAAGGGAAGATGCATCAAGGCTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTTAGAAGACCTGAATCATGCGCTGATTGGAATTCATTTCTCGAGCGATTTCTTCCCAGGCAAATTGCAATGACTCGAGGTAGACGGGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCACTGGAGCAAGTCACAAAAGAAGATGCAAGACAACAATTTCTGCACATAATCAGAGCACTTCCTTATGGTTTTTCGGTATTTTTCAATGTTCGTAAAATTGATGATCCTATTGGCCTCTTGCCTGGACGAATAATATTAGCAATTAACAAGAGAGGGGTTCATTTTTTCCGCCCCATTCCGAAGGAATATTTGCACTCAGCTGAGTTAAGAGACATAATGCAATTTGGAAGCAGTAATACTgctgtattttttaaaatgcgAGTTGCCGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGgGAGAAGAAATCTGTGTAGCTCTTCAGACACACATAAATGATGTAATGCTGCGCCGATATTCCAAAACACGATCTTCTCCTACCGGTTCTTTGGATAAAGAAATTTCTAATGAATTCAAGTCACCGAATTCGGAATCTTACGAGAAACGTGTTCAAGATTTAACAAAAGTTCTTGAAGATTCTAAAAGGAATGCTGATCAATTGCAGGAAGAATTGCATGAGAAGCAAAAACTAGAAGAGGAGATGCGCCAAGAATTAGAAGACTTGAAGGATTCTTTAGAAACTTCCAAGCATAGTCTTGAAGAAGTTACTAATGACCGTGATAGGCTTATATCACTATGTGATGATAAAGATAAAGAACTTCATGctaaaattgtagaaaaaagGAGCTTGGAAGCAAAGATGGCCAAGTTGAATAGTTTGATGACAGAGAGAATTACCAATAAGGACACCGTTGGAGAAAATGACCAAGTGTTGCGAAAACTTGAAGATGACTTAAAACTTTGTAGAGATGAGTGTATGGTCGCAGAAGAGACCATCAAAAGCTTGACAAATGAGAAGTTGATTTTGACACAAAAGATATCTAAGCTTGAGAAGAAGAATGCTGAAGagATTAGTTTTCTTCAACGGAAACTCGACCAAGAACGCAAATCTCTGAACTCTCAAGTGCATGACCTTGAAAGGAAACTAGCTGTGCTTAGACAAGAATTAGTTGTGGCTCAATCTACACTTTCAACGAAGGACTCTGAATTGGCTGTgttgaaaaacaatttaaaagaaCTAGAAGATTTAAGAGAAATGAAAGAGGACATTGACAGAAAGAATGAACAAACAGCTGCTATATTGAGGATGCAAGGGGCTCAACTAGCTGAAATGGAATCGCTTTATAAGGAAGAGCAAGTTCTCAGAAAGCGATATTTCAATACCATAGAAGATATGAAAGGAAAAATACGAGTTTACTGTCGGCTAAGACCTATTGGTGAAAAAGAGATTGCTGACAAAGAAAGAGATGTTGTAACAACAATAGACGAATTTACCATTGAGCATCCATGGAAAGATGATAAATCAAAACAACATCTATATGATCGTGTCTTTAACGGTGACGCCACTCAAGAAGAAGTATTTGAGGATACAAGGTACTTGGTGCAATCTGCTGTAGATGGTTATAATGTTTGCGTATTTGCATATGGTCAAACCGGATCTGGAAAGACATTTACAATCTACGGATCCGAAAACAATCCTGGCCTTACACCGCGTGCTACTGCAGAGCTTTTTAGAATTTTAAAGAGAGATAGCAAGaagatttctttttctttgaagGCATACATGTTGGAGTTATATCAAGATACACTTGTTGATCTCTTGTTGCCTAAGAATGCAAAGCGATTAAAGTTGGACATTAAGAAGGATTCAAAGGGAATGGTAACGGTAGAAAATGTAACAACTGTGCCAATTTCTACCATGGAGGAATTGAATAGCATAATACAAAAGGGTTCCGAACGACGACATACAGCAGGGACACAAATGAACGAAGAGAGCTCAAGATCGCATCTTATACTATCGGTTGTAATTGAAACTGTCAACCTTCAAAGTCAATCAGCTGCAAGAGGAaagCTGAGTTTTGTGGATCTTGCCGGTTCAGAAAGAATTAAAAAGTCGGGTTCCGAGGGTAGTCAACTGAAAGAAGCTCAAAGTATAAACAAATCATTATCAGCACTTGGAGATGTTATTGGCGCTTTATCTTCTGGTGGTCAACACATACCTTATAGAAATCACAAGTTAACTATGTTAATGAGTGATTCACTTGGAGGCAATGCGAAAACTCTCATGTTTGTGAATGTATCTCCAGTTGAATCAAGCTTGGATGAAACACATAACTCTCTCATGTATGCGTCGCGAGTGAGGTCAATTGTGAATGATCCGAGTAAAAATATTTCTTCGAAAGAGATAGCTCGACTGAAGAAATTAGTTGCTTATTGGAAGGAGCAAGCAGGTAGGAGAGGGGAGGATGAAGATTTAGAAGAAATTCAAGATAAACGGCCAACAAAAGAGAAGACCGACGGTCATGGCCATGGCCGCTATACTATGTAG 3810 0.3898 MIFDTPPSGAQSVRTNRTSFGSSIGNGSTPLHSYATVSNGDDYDSDGSNFAPPTPTVLPMAIPAELAGAGPLIDRFQVEGFLKLMQKQIHSGGKRGFFSKRSVGPQVREKLTIEDMLCFQKDPIPTSLLKLNGDLASRATKMFQMILKYIGVDSSSLSLEDRVELVSKLYKQSLKHSELRDELFVQLSKQTRNNPEREYLNKSWELMYLCASCMPPSKDIGGYLSEYIHNVAHGATVDPGIREVALNTLNALKHSLKAGPRHIIPGPMEIEARITRKKLTTVVFFLDETFEEITYDMATTVADAVEELAGIIKLSTYSSFGLYECRKVVTSSKSADSGNEEYIGLDDNKHIGDLLAEFKAVKDRSKGEILHCKLVFKKKLFRESDEGVTDPMFWQLSYVQLQHDYILGNYPIGREDASRLSALQILAEIGFVRRPESCADWNSFLERFLPRQIAMTRGRREWELDILSCYHSLEQVTKEDARQQFLHIIRALPYGFSVFFNVRKIDDPIGLLPGRIILAINKRGVHFFRPIPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKTRSSPTGSLDKEISNEFKSPNSESYEKRVQDLTKVLEDSKRNADQLQEELHEKQKLEEEMRQELEDLKDSLETSKHSLEEVTNDRDRLISLCDDKDKELHAKIVEKRSLEAKMAKLNSLMTERITNKDTVGENDQVLRKLEDDLKLCRDECMVAEETIKSLTNEKLILTQKISKLEKKNAEEISFLQRKLDQERKSLNSQVHDLERKLAVLRQELVVAQSTLSTKDSELAVLKNNLKELEDLREMKEDIDRKNEQTAAILRMQGAQLAEMESLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPIGEKEIADKERDVVTTIDEFTIEHPWKDDKSKQHLYDRVFNGDATQEEVFEDTRYLVQSAVDGYNVCVFAYGQTGSGKTFTIYGSENNPGLTPRATAELFRILKRDSKKISFSLKAYMLELYQDTLVDLLLPKNAKRLKLDIKKDSKGMVTVENVTTVPISTMEELNSIIQKGSERRHTAGTQMNEESSRSHLILSVVIETVNLQSQSAARGKLSFVDLAGSERIKKSGSEGSQLKEAQSINKSLSALGDVIGALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIVNDPSKNISSKEIARLKKLVAYWKEQAGRRGEDEDLEEIQDKRPTKEKTDGHGHGRYTM 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00986 1269 CDD KISc_C_terminal 887 1212 - -
Tsu05g00986 1269 SMART kinesin_4 887 1218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00986 1269 MobiDBLite consensus disorder prediction 596 620 - -
Tsu05g00986 1269 Pfam FERM central domain 387 499 IPR019748 -
Tsu05g00986 1269 Gene3D Kinesin motor domain 876 1212 IPR036961 -
Tsu05g00986 1269 MobiDBLite consensus disorder prediction 596 615 - -
Tsu05g00986 1269 SUPERFAMILY PH domain-like 499 587 - -
Tsu05g00986 1269 Pfam MyTH4 domain 168 272 IPR000857 GO:0005856
Tsu05g00986 1269 ProSiteProfiles FERM domain profile. 279 593 IPR000299 GO:0005856
Tsu05g00986 1269 Gene3D - 278 382 - -
Tsu05g00986 1269 MobiDBLite consensus disorder prediction 1236 1269 - -
Tsu05g00986 1269 Gene3D MyTH4 domain 98 277 IPR038185 -
Tsu05g00986 1269 PRINTS Kinesin heavy chain signature 961 982 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00986 1269 PRINTS Kinesin heavy chain signature 1160 1181 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00986 1269 PRINTS Kinesin heavy chain signature 1080 1097 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00986 1269 PRINTS Kinesin heavy chain signature 1111 1129 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00986 1269 Gene3D - 1213 1261 - -
Tsu05g00986 1269 MobiDBLite consensus disorder prediction 1 26 - -
Tsu05g00986 1269 ProSiteProfiles MyTH4 domain profile. 119 274 IPR000857 GO:0005856
Tsu05g00986 1269 MobiDBLite consensus disorder prediction 8 26 - -
Tsu05g00986 1269 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 611 1261 - -
Tsu05g00986 1269 SMART B41_5 275 499 IPR019749 -
Tsu05g00986 1269 Coils Coil 732 773 - -
Tsu05g00986 1269 Coils Coil 782 854 - -
Tsu05g00986 1269 SUPERFAMILY Second domain of FERM 377 494 IPR035963 -
Tsu05g00986 1269 Coils Coil 617 679 - -
Tsu05g00986 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 889 1238 IPR027417 -
Tsu05g00986 1269 SMART MyTH4_1 119 274 IPR000857 GO:0005856
Tsu05g00986 1269 CDD FERM_B-lobe 395 492 IPR019748 -
Tsu05g00986 1269 ProSitePatterns Kinesin motor domain signature. 1110 1121 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu05g00986 1269 CDD FERM_C_KCBP 497 602 - -
Tsu05g00986 1269 Gene3D - 391 492 IPR014352 -
Tsu05g00986 1269 PANTHER KINESIN-RELATED 611 1261 IPR027640 GO:0003777|GO:0007018
Tsu05g00986 1269 Pfam Kinesin motor domain 895 1210 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g00986 1269 Gene3D - 497 604 IPR011993 -
Tsu05g00986 1269 ProSiteProfiles Kinesin motor domain profile. 889 1210 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00986 Tsu-Chr5 8545646 8551748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00986 34 1260 Calmodulin-binding Proteins AT5G65930 70.645 0.0 1776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00986 - - gmx:100782701 2086.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00986 05 8545646 8551748 Tsu05g00986 05 8545646 8551748 ECH
Tsu05g00986 05 8545646 8551748 Tsu04g02724 04 31179962 31187938 PCT