Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00984 ATGCTTCCATTTCAGTGTTGTCGCCGCCGCCACAAATCCTCCGACATGGCTTACCTCACCACCCTCATCAGCATTCTCCTCCTCTTCCCGTCAACAACCTCTCAAACACTACAAAATCACTCTTTCGATACCTTCAATTCCACCAGCTTTAACTTCCTCGACGTTATACCCTCCGCATCAATCAACGGAGGAGCTTTACAGGTAACCCCAGACAGCGCCGGAAGTGAAATGGTCGTCACTCTCAACAACAACTCCGGCAGAATCTTCTTCAAAACCCCATTCAAACtctgggacgactcttcctcatCCCAAAAACTCGCTTCCTTCAACACCTCTTTCCTCATCAACATCTTTCGCGTCAACAACGGAACCCCCGGCGAAGGTCTAGCTTTCATCATCGCACCTTCTCTTACAATTCCTCTCAACAGCTCAGGCGGTTACCTCGGTTTAACAAACTCAACAACTGACGGTAACGTAACTAACCGTTTCATCGCCGTTGAACTTGACACCGTTAAACAAGATTTCGATATTAACAACAATCATATCGGACTTAACATAAACAGTGTTCGTTCAAATCTTTCTGTTCCTCTTGATTTTGAACTCGCTCCTAATGGAACtaagttttatgttttatgGATTGAATACGACGGTGATCGGAGACATATCGATGTATACATGGCGGAGCAACCTTCAAGGGAATTACCTATAGTAAAAAAACCGGTTAAACCGGTTTTAAATTCGAGTTTAGATCTAAAAGAATGGGTGAACCGGGAATCTTATTTTGGGTTTTCTGCTTCAACCGGAAATACTGTTGAGTTAAATTGTATACTTAAATGGAATATTTCAATTGAGGCTTTTGGTGaaaagggtaaaagtggaaaagCATTGGCTATTGGTTTAGGTGTTGGGATTCCTctatttttgattttgattagtGCTGgattatactattattatttgattaagaagaagaaggaggaggATAATTATGGTTCTAATTCACAAATTATGGGGACATTGAAGAGTTTACCAGGGACACCAAGAGAGTTTAATTATCAAGAATTGAAGAAAGCTACTAATAATTTTGATGAGAAATTTAAACTTGGTGAAGGTGGATACGGTGTCGTTTATAGAGGAATATTACCTAAGGAGAAATTAGAAGTTGCTGTTAAGAAATTTTCTAGAGATAAGATGAAAAGTACTGATGATTTCTTAGCTGAACTTACTATTATCAATCGTCTTCGTCATAAACATCTTGTTAAATTACAAGGATGGTGCCACAAAAACGGAGTATTGCTCTTGGTATACGACTACATGCCTAATGGAAGTTTAGACGACCACATATTTTGTGAGGAAGGAACAAGCACAACCCCACTAAGTTGGCCTCTAAGGTACAAAATCCTATCAGGTGTCGCTTCTGCATTGAATTATCTCCACAACGAGTATGATCAAACAGTCGTTCACAGAGACCTTAAAGCAAGCAACATAATGCTAGACTCAGATTTCAACGCTCGTTTAGGAGATTTCGGGTTAGCCCGTGCACTAGAGAATGAAAAAACATCCTATGCAGAATTAGAAGGAGTACAAGGAACAATGGGATACATAGCCCCAGAATGTTTCCACACAGGAAAAGCAACGAGAGAATCAGATGTTTATGGATTTGGTGCTGTGTTACTTGAAACCGTGTGCGGTCAAAGACCATGGACTAAAATTGAAGGGTACCAATTTTTGGTCGATTGGGTTTGGTATTTGCATCGCGAAGGAAGAATATTGGAAGCAGTTGATAAAAGTGTTGGCAATGAATATGATGTTGAAGAGGTAGAGAGAATATTGAAACTTGGATTGATTTGCTCTCATCCTGTTGCTAGTGAGAGACCAAATTTGCAAACAATTGTTCAGATTTTATCTGGTTCAGTTAATGTTCCTTATGTACCACCTTTTAAACCGTCTTTTATGTGGCCCGCGGTGGATTTAGCTAGTCTTGCAAGTACTGATTTTACAGGAGGAACAACTACTAGTGAGTATACACCAATCAATAGTAACACTACACAATCTTCTTTGCGCGTTGAATTGTCAGATAATGGTTCTCTGGTCTAA 2097 0.381 MLPFQCCRRRHKSSDMAYLTTLISILLLFPSTTSQTLQNHSFDTFNSTSFNFLDVIPSASINGGALQVTPDSAGSEMVVTLNNNSGRIFFKTPFKLWDDSSSSQKLASFNTSFLINIFRVNNGTPGEGLAFIIAPSLTIPLNSSGGYLGLTNSTTDGNVTNRFIAVELDTVKQDFDINNNHIGLNINSVRSNLSVPLDFELAPNGTKFYVLWIEYDGDRRHIDVYMAEQPSRELPIVKKPVKPVLNSSLDLKEWVNRESYFGFSASTGNTVELNCILKWNISIEAFGEKGKSGKALAIGLGVGIPLFLILISAGLYYYYLIKKKKEEDNYGSNSQIMGTLKSLPGTPREFNYQELKKATNNFDEKFKLGEGGYGVVYRGILPKEKLEVAVKKFSRDKMKSTDDFLAELTIINRLRHKHLVKLQGWCHKNGVLLLVYDYMPNGSLDDHIFCEEGTSTTPLSWPLRYKILSGVASALNYLHNEYDQTVVHRDLKASNIMLDSDFNARLGDFGLARALENEKTSYAELEGVQGTMGYIAPECFHTGKATRESDVYGFGAVLLETVCGQRPWTKIEGYQFLVDWVWYLHREGRILEAVDKSVGNEYDVEEVERILKLGLICSHPVASERPNLQTIVQILSGSVNVPYVPPFKPSFMWPAVDLASLASTDFTGGTTTSEYTPINSNTTQSSLRVELSDNGSLV 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00984 698 SUPERFAMILY Protein kinase-like (PK-like) 344 655 IPR011009 -
Tsu05g00984 698 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 46 658 - -
Tsu05g00984 698 PANTHER - 46 658 - -
Tsu05g00984 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Tsu05g00984 698 CDD lectin_legume_LecRK_Arcelin_ConA 39 280 IPR001220 GO:0030246
Tsu05g00984 698 Gene3D - 37 294 - -
Tsu05g00984 698 ProSiteProfiles Protein kinase domain profile. 362 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00984 698 Gene3D Phosphorylase Kinase; domain 1 347 438 - -
Tsu05g00984 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 45 284 IPR013320 -
Tsu05g00984 698 ProSitePatterns Protein kinases ATP-binding region signature. 368 392 IPR017441 GO:0005524
Tsu05g00984 698 Pfam Protein kinase domain 364 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00984 698 CDD STKc_IRAK 368 635 - -
Tsu05g00984 698 Pfam Legume lectin domain 40 286 IPR001220 GO:0030246
Tsu05g00984 698 SMART serkin_6 362 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00984 698 Gene3D Transferase(Phosphotransferase) domain 1 439 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00984 Tsu-Chr5 8525221 8529648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00984 18 668 Receptor kinase-like Gene Family AT5G55830 36.628 3.90e-131 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tsu05g00984 Pkinase 4.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00984 - - gmx:100780014 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00984 05 8525221 8529648 Tsu05g00984 05 8525221 8529648 ECH