Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00981 ATGCCTTCAGTACTTGTTGCTAATTCTAGCTTTTGCTTTTCTGATAAGGTTTATGTAGTGTACATGGGAAGCAAAAGTAGTGATCAAGACCCAGATGATATTCTgaatcataatcatcaaattCTTGCAGAAGTTAATAGAGGAAGTGTTGAACAAGCACAGGCTTCACATATCTATAGCTACAAACATGGTTTCAAAGGCTTTGCAGCAAAGCTCACTGATGAACAGGCTTACCAAATTTCAAAAATGCCGGGAGTGGTTTCGGTGTTCCCTAATTCTAAAAGAAAGTTGCATACTACTCATTCATGGGATTTCATGGGACTTTTAGATGATGAAACAATGAAGAATAAGGGTTACTCAACCAAAAACCAAGCAAATGTCATTATTGGTCTCATTGATACTGGAATTTGGCCTGAATCACCGAGCTTTAGAGACACCGACATGCCACCAGTGCCGCGTGGATGGAAAGGCCATTGTCAACAAGGAGAAGCTTTCAATGCTTCATCTTGCAACAGGAAAGTAATAGGAGCAAGATACTATATGAGTGGATATGAAGCAGAAGAAGGATCAGACAAAAAAGTCTCTTTCAGATCTCCAAGAGACAGCTCTGGTCATGGAAGTCATACAGCATCCACAGCTGCAGGACGATACGTGGCAGACATGAATTACAAGGGTTTGGCATCAGGAAAAGCAAGGGGAGGTGCACCTATGGCTAGAATTGCTGTTTACAAAACATGTTGGGATTCTGGTTGCTATGATGTGGATTTGTTAGCTGCCTTTGATGATGCCATAAGAGATGGTGTTCACATTATATCTTTATCTCTTGGTCCTGAAGCACCTCAAGGTGACTATTTCAATGATGCCATATCTGTGGGATCTTTCCATGCTGCTAGACATGGAGTGCTTGTAGTAGCATCAGCTGGAAATGAAGGAAATGTTGGCTCTGCAACAAACCTTGCACCATGGATTATCACTGTTGCTGCTGGTTCAACAGATAGGGATTTCACCTCTGATATTCTGTTAGGAAATGGTGTTCACATCACGGGTGAGAGTCTCAGTCTATTCGAGACGAATGCTTCCAGAAGAATAATTCCTGCATCTGAAGCCTTTGCGGGGTATTTTACTCCTTATCAATCCAGTTACTGTTTAGATAGCTCACTAAACAAGACTAAGACCAAAGGGAAGATTTTGGTGTGTAGACATGATGAGGGTTCAATGGcatcaaaattggaaaaaagtAAGGTAGTGAAAGAGGCGGGTGGAGTTGGGATGGTACTCATTGATGAAACAGATCAAGGTGTTGCCATTCCATTTGTAATACCATCGGCTATTGTTCAAAGGAAAACAGGAGAACAGATTCTATCCTATATCAATAGCACACGCATACCTACGTCAAGGATTTTCGGGGCCAAGACAGTAGTAGGAGTTCAGCCCGCACCGCGTGCAGCAGCATTTTCCTCCAAAGGCCCCAATTCCTTAACCCCAGAAATTTTAAAGCCTGATGTTTTAGCTCCCGGGTTAAACATCCTAGCAGCATGGTCTCCAGCAGCAGCTGGAAACATGAAGTTCAATATTCTATCAGGAACTTCTATGTCTTGTCCTCATGTTACTGGAATTGCAGCCTTTATAAAAGCCGTGCATCCTTCATGGTCTCCATCTGCTATCAAATCTGCCATCATGACTACTGCAACAATTCTGGATAAGCACAATGAACCGATTAGAGTGGATCCTGATAGAGGAAGGGCTAATGCATTTGATTATGGATCAGGGTTTGTGAACCCTGCAAGAGCACTAGAGCCTGGTCTGGTATATGATTCACAGCCTGAAGATTTTGTTGCATTCTTGTGTTCAATTGGTTATGATGAGAAGTCGCTCCATCTCATTACAAGAGACAACAGCACATGCAATGGGGCATTCAAAACACCATCTGACCTCAACTATCCATCTATTACAGTTCCCAATCTTGAAGACAACTCTTCAGCAACTCGGGTTGTGACTAATGTTGGAAAAGCTAGAAGTATATATGAAGCTGAAGTGTTGTCTCCAGCTGGAGTTAATGTTACTGTTGTGCCAAACCGGTTAGTATTCACAAGAACAGGACAGAAACTCAAGTTTACTGTGAATTTCAAAGTGACAGCTCCCTTAAAGGGATATGCATTTGGGTTCTTAACATGGAGGAACAGAATATCACAGGTCACCAGTCCTTTAGTTGTTAAGGTTGCAACAGCAAGCCTTGGGTTGGAAGCAATTCCAAGCACAGAATTTGAAGAACTGaatgttatgaaaaaGGACTTTGGCAAAGCGGGGAAAAATTTAAGGGCAATCATGATGAAATCAGAAATTCAGGACCTGATTGTTGGAAGGCCAACAAGTACCGGCAGATATCCTAGTTCTTCCAATATCAGTAAGAATGTAAGATGTTGA 2424 0.4142 MPSVLVANSSFCFSDKVYVVYMGSKSSDQDPDDILNHNHQILAEVNRGSVEQAQASHIYSYKHGFKGFAAKLTDEQAYQISKMPGVVSVFPNSKRKLHTTHSWDFMGLLDDETMKNKGYSTKNQANVIIGLIDTGIWPESPSFRDTDMPPVPRGWKGHCQQGEAFNASSCNRKVIGARYYMSGYEAEEGSDKKVSFRSPRDSSGHGSHTASTAAGRYVADMNYKGLASGKARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHIISLSLGPEAPQGDYFNDAISVGSFHAARHGVLVVASAGNEGNVGSATNLAPWIITVAAGSTDRDFTSDILLGNGVHITGESLSLFETNASRRIIPASEAFAGYFTPYQSSYCLDSSLNKTKTKGKILVCRHDEGSMASKLEKSKVVKEAGGVGMVLIDETDQGVAIPFVIPSAIVQRKTGEQILSYINSTRIPTSRIFGAKTVVGVQPAPRAAAFSSKGPNSLTPEILKPDVLAPGLNILAAWSPAAAGNMKFNILSGTSMSCPHVTGIAAFIKAVHPSWSPSAIKSAIMTTATILDKHNEPIRVDPDRGRANAFDYGSGFVNPARALEPGLVYDSQPEDFVAFLCSIGYDEKSLHLITRDNSTCNGAFKTPSDLNYPSITVPNLEDNSSATRVVTNVGKARSIYEAEVLSPAGVNVTVVPNRLVFTRTGQKLKFTVNFKVTAPLKGYAFGFLTWRNRISQVTSPLVVKVATASLGLEAIPSTEFEELNVMKKDFGKAGKNLRAIMMKSEIQDLIVGRPTSTGRYPSSSNISKNVRC 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00981 807 Gene3D - 332 474 - -
Tsu05g00981 807 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 10 743 - -
Tsu05g00981 807 SUPERFAMILY Subtilisin-like 31 699 IPR036852 GO:0004252|GO:0006508
Tsu05g00981 807 Pfam PA domain 370 453 IPR003137 -
Tsu05g00981 807 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Tsu05g00981 807 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 8 98 IPR037045 -
Tsu05g00981 807 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Tsu05g00981 807 PRINTS Subtilisin serine protease family (S8) signature 124 143 IPR015500 -
Tsu05g00981 807 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Tsu05g00981 807 CDD PA_subtilisin_like 338 467 - -
Tsu05g00981 807 Pfam Peptidase inhibitor I9 17 98 IPR010259 -
Tsu05g00981 807 ProSiteProfiles Serine proteases, subtilase domain profile. 102 598 - -
Tsu05g00981 807 Pfam Fibronectin type-III domain 644 738 IPR041469 -
Tsu05g00981 807 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 743 IPR045051 -
Tsu05g00981 807 Gene3D Peptidase S8/S53 domain 126 611 IPR036852 GO:0004252|GO:0006508
Tsu05g00981 807 CDD Peptidases_S8_3 96 564 IPR034197 -
Tsu05g00981 807 Pfam Subtilase family 126 566 IPR000209 GO:0006508|GO:0008236
Tsu05g00981 807 MobiDBLite consensus disorder prediction 191 211 - -
Tsu05g00981 807 Gene3D - 615 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00981 Tsu-Chr5 8513698 8520222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00981 18 740 Subtilisin-like Serine Gene Family AT2G04160 43.808 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00981 - - gmx:100780538 1258.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00981 05 8513698 8520222 Tsu05g00981 05 8513698 8520222 ECH
Tsu05g00981 05 8513698 8520222 Tsu04g02721 04 31126561 31132051 PCT