Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00964 ATGGCTGCCATGGAAGGAAGAATCTCTGAGGAATTAACACCTAGGTATTATGCCCTTTGTACCATTGGAGGAATGCTTAGTGCTGGTACCACTCATCTTGCTACAACTCCTCTTGATGTCTTGAAAGTTAACATGCAGGTGCATCCTATTAAATATTACAGTATTTCGTCTTGCTTTACTACCTTATTGAGGGAACAAGGGCCTTCTGTCCTTTGGAAAGGATGGACAGGCAAGTTCTTTGGCTATGGTGCTCAAGGAGGGTGCAGATTCGGTCTCTACGAATATTTTAAGGGAGTTTACTCTAATGTATTGGTAGACCAGCACAGGAGTCTTGTGTTCTTTCTTAGTAGTGCATCTGCTGAAGTTTTTGCCAATTTAGCTCTATGTCCATTTGAAGCCGTTAAAGTCAGGGTTCAAGCACAACCCAGTTTTGCTAAGGGTATGTTTGACGGATTTCCGAAAGTATATGCAGCAGAAGGCGCACGAGgATTCTACCGTGGACTTGTTCCACTTTTGGGTCGAAACATTCCATTTTCCATGGTGATGTTCTCAACGTTCGAGCACTCTGTTGATTTTTTATATCGTAatgttgtcaaaagaaaaaaggagGAATGTTCAAAAGCTCAACAACTTGGTGTGACATGTTTAGCTGGATATACCGCAGGATCTGTTGGTAGCTTTGTTTCTAATCCTGCTGACAATATAGTAGCTTCTCTTTATAACAGAAAAGCTGATAGTCTTCTGCTGGCTATCAGAAAAATTGGACTAGCCAATTTATTTACCAGGAGTCTTCCTATTAGAATGTTGCTGGTTGGTCCTTCCATAACTTTGCAATGGTTTTTCTACGACACTATCAAAGTTTTAGGTGGATTGCCAACTAGTGGTGAAGTTTCACCTGACTTAAGAGAAGATGGGACAAGCTAG 924 0.4037 MAAMEGRISEELTPRYYALCTIGGMLSAGTTHLATTPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVLVDQHRSLVFFLSSASAEVFANLALCPFEAVKVRVQAQPSFAKGMFDGFPKVYAAEGARGFYRGLVPLLGRNIPFSMVMFSTFEHSVDFLYRNVVKRKKEECSKAQQLGVTCLAGYTAGSVGSFVSNPADNIVASLYNRKADSLLLAIRKIGLANLFTRSLPIRMLLVGPSITLQWFFYDTIKVLGGLPTSGEVSPDLREDGTS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00964 307 SUPERFAMILY Mitochondrial carrier 16 284 IPR023395 -
Tsu05g00964 307 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 304 IPR044677 GO:0005315|GO:1990547
Tsu05g00964 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 288 IPR018108 -
Tsu05g00964 307 PANTHER PHOSPHATE CARRIER PROTEIN 4 304 - -
Tsu05g00964 307 Pfam Mitochondrial carrier protein 114 196 IPR018108 -
Tsu05g00964 307 Pfam Mitochondrial carrier protein 20 101 IPR018108 -
Tsu05g00964 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 99 IPR018108 -
Tsu05g00964 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 192 IPR018108 -
Tsu05g00964 307 Gene3D Mitochondrial carrier domain 19 289 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00964 Tsu-Chr5 8379494 8390855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00964 1 297 Chloroplast and Mitochondria Gene Families AT2G17270 66.779 3.71e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00964 K15102 - gmx:100788561 558.14