Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00956 ATGAAGCTTTACGTTTCAATCTTCATCTTCGCTGTATTCtttatcttcatcatcttcttcacatACGTATCATCCACCTCCCAATCCCAACAACTCTCTCTTCTCCACAACGACATCGGTTTCTCTCCTTCACCTCTCGTTCTTCCGCCGTCACCGTCACCGTCGGGTTCCAATTCATTGGACATCAAACCTGCTACGGCACTTGTTGCTGCCCTAGATGGTACTGTTTATTTGGTTGAAAGTTCTTCTGGGAGGGTAATTTGGTCTTTTTCAACTGGATCCCCAATTTATCATTCTTCATCTAATACTCCTTCTTCTGGACTCATTGAATGTGGTGATGACTGGGAATTGATCTTTCATGATACCCATTTTGGCAAAACGAGACTCAAGGAATCTGTTGCTGATTATGTTGCTGTTACACCTATTGTGTCAAAAGATGGAGCTGTTATACTTGGATCCAAAAGGAGCACTGTATTTGAAGTCGATGCTAAAACTGGAAAGCTCCTTAGAAGTTATAGTGCTTCTGATTTTCATAATGTTTCTACTACTGCAGTGTGGAGTGGTGACAAAGACAATAATAATGTTACTAACGGCTTCGGTGCAAATAATAAGGAGCTTGCTGATCCAGCAAAGCTCAATATACCAGAGTTCTTGCTCCAGATAGTTAGAActgattattttttacaatctGTGGGTCCTGGTTCTGGAATAGTGTTGTGGACTATGTCAGTAGCTGAATTTGAGTCTGTATTATTTTGCCAGCATAATGAAAGTCCTATTTTGGGGGCTTCACTTGATGCAGAAGGCGGGTATGCTTCTGATGTTGACAGCGGCTTGGATTTTGCTATGCCGTATTCGTGTCAAGACAGAAAACTCAGAGAAGTCTATCGCCAGCgaaagaattttctttttgaacctGCTAAAATTGAAAGATCATCCGATGCTGGTGCTTATCAAGAGAACGGCATGCTCCCGATGCCGGCTTCAAAACTGATGCTTCCACCACAACCTAATAGTGATAGATTCCTCCCTGGATTCCTCCCCGGTCATGATGGTAATATGATGCTTCCTGGGCCCGGGCCAAATTCTTTGCTGCCAAAAATCAGCTTCTATGATAGTAATGATGATGCAGTTATGCTCCCTGAGCCTCTTATGGACATCACTGCACCAAGTGAAGTTAATCCGAGCAGGGTGATTGGATTGTCAATATCGTTATTGGTTGTAATATTTGTGGCATTTCTTTCGATATTGTACCAAAATCGATTTACAAATAGAGTTGCATCGAAGGTCCGAATCAGTGACTCAGATTTGAGAAGCCCACCTCCTAAGAAAAAGAGAGCACGTAAGTCAGGAAAAAACAATGTCATTGTTGACAAACAGGGTAATAATCTGTCTTCAATTGAGGAGAATATACGAATACATAAGGAAGCAGAAAATGAAGCACGGTTACACTATAATAAAGTTAACGGGCGCATGATTGGTAAGCTGATTGTATCAAATGAACAAATTGCGAAGGGAAGTAATGGTACCATTGTCTTTGAGGGTATATATGAAGGTCGGGCAGTTGCTGTCAAACGCCTTGTTACGGCTCATCATGATAAAGCTCATAAAGAAATCCAAAATCTCATTGCTTCCGACCGTCATCCAAATATTGTTCGATGGTATGGCGTGGAATCTGATCACGATTTTGTTTACCTTGCTCTGGAGCGTTGTGCGTTCAACTTGGATGATTTGATTACTGTTTATTCAGATATGTCAGAGAATTCAGTGTTAAGCAAGAATCCAGcttttgaatttttcaaaaagGCCCAGACAGAGACACAGAGGGATGATATGCGGTGTCTTTGGAAAGCAAATGGTTATCCATCTCCTCTTTTATTAAAGCTTATGAGGGAAGTGGTTTCCGGACTTGCTCATTTGCATGAACTAGGAATAATACATCGGGATTTGAAACCACAAAATGTTTTGATAATCAAGGAAAAATCATTATGTGCTAAGCTTTCTGATATGGGGATTAGTAAACAACTACCTGAAGATATGTCTTCTTTAGGTCATAGTTCTACTGGTTGTGGCAGTTCGGGTTGGCAAGCGCCAGAGCAGCTTGTTCTGCAGGGACGTCAAACACGCGCTGTAGATTTGTTTAGTTTAGGTTGTGTCCTCTTTTTCTGTATGACAGCAGGAAGGCATCCATTTGGAGAACGCCTTGAGCGTGATTTCAacattgttaaaaataataaagatctTTTCTTAGTGGAGTTCTTTCCTGAAGCTGAGGATCTTATTTCTTCTTTATTAAACCCTGACCCCGATTTAAGGCCAAAGGCGATTGAAGTATTGCACCATCCTCTATTTTGGAGTTCTGAGATGAGACTTTCATTTCTTCGTGACGTTAGTGACAGGGTGGAACTTGAAGATAGAGAGACTAATTCTGTTCTTTTGAATGTATTAGAGAGCACTGCTCCAGTGGCTTTAGGTGGAAAATGGGACGAAAAGATGGAACCAGCTTTCCTTGCCAACATTGGTCGTTACAGGCGATATAAATTTGACAGCGTTCGAGACTTGTTAAGGGTCATGAGAAACAAGCTAAATCATTATAGGGAATTGCCTCAAGAAATTCAGGAATTGATAGGACTTGTTCCGGAAGGATTCAATGATTACTTTGCAAGTCGATTTCCAAGGCTCTTGATTGAAGTTTACAAAGTTATCTGCAACTATTGCAAGGATGATGAATGTTTTCAAAGATATTTTAGAGACATTAATTAA 2763 0.3963 MKLYVSIFIFAVFFIFIIFFTYVSSTSQSQQLSLLHNDIGFSPSPLVLPPSPSPSGSNSLDIKPATALVAALDGTVYLVESSSGRVIWSFSTGSPIYHSSSNTPSSGLIECGDDWELIFHDTHFGKTRLKESVADYVAVTPIVSKDGAVILGSKRSTVFEVDAKTGKLLRSYSASDFHNVSTTAVWSGDKDNNNVTNGFGANNKELADPAKLNIPEFLLQIVRTDYFLQSVGPGSGIVLWTMSVAEFESVLFCQHNESPILGASLDAEGGYASDVDSGLDFAMPYSCQDRKLREVYRQRKNFLFEPAKIERSSDAGAYQENGMLPMPASKLMLPPQPNSDRFLPGFLPGHDGNMMLPGPGPNSLLPKISFYDSNDDAVMLPEPLMDITAPSEVNPSRVIGLSISLLVVIFVAFLSILYQNRFTNRVASKVRISDSDLRSPPPKKKRARKSGKNNVIVDKQGNNLSSIEENIRIHKEAENEARLHYNKVNGRMIGKLIVSNEQIAKGSNGTIVFEGIYEGRAVAVKRLVTAHHDKAHKEIQNLIASDRHPNIVRWYGVESDHDFVYLALERCAFNLDDLITVYSDMSENSVLSKNPAFEFFKKAQTETQRDDMRCLWKANGYPSPLLLKLMREVVSGLAHLHELGIIHRDLKPQNVLIIKEKSLCAKLSDMGISKQLPEDMSSLGHSSTGCGSSGWQAPEQLVLQGRQTRAVDLFSLGCVLFFCMTAGRHPFGERLERDFNIVKNNKDLFLVEFFPEAEDLISSLLNPDPDLRPKAIEVLHHPLFWSSEMRLSFLRDVSDRVELEDRETNSVLLNVLESTAPVALGGKWDEKMEPAFLANIGRYRRYKFDSVRDLLRVMRNKLNHYRELPQEIQELIGLVPEGFNDYFASRFPRLLIEVYKVICNYCKDDECFQRYFRDIN 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00956 920 PANTHER IRE1-RELATED 63 916 IPR045133 GO:0004521|GO:0004674|GO:0030968
Tsu05g00956 920 Gene3D Phosphorylase Kinase; domain 1 483 569 - -
Tsu05g00956 920 Gene3D Transferase(Phosphotransferase) domain 1 608 786 - -
Tsu05g00956 920 Pfam Ribonuclease 2-5A 790 916 IPR010513 GO:0004540|GO:0006397
Tsu05g00956 920 ProSiteProfiles KEN domain profile. 787 918 IPR010513 GO:0004540|GO:0006397
Tsu05g00956 920 Gene3D - 56 278 IPR015943 GO:0005515
Tsu05g00956 920 SMART serkin_6 497 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00956 920 SUPERFAMILY Protein kinase-like (PK-like) 500 807 IPR011009 -
Tsu05g00956 920 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 63 916 - -
Tsu05g00956 920 SMART PGNneu 849 903 - -
Tsu05g00956 920 Gene3D KEN domain 787 920 IPR038357 -
Tsu05g00956 920 MobiDBLite consensus disorder prediction 434 453 - -
Tsu05g00956 920 SMART ire1_9 141 173 IPR018391 -
Tsu05g00956 920 SMART ire1_9 60 91 IPR018391 -
Tsu05g00956 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Tsu05g00956 920 Pfam Protein kinase domain 500 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00956 920 CDD RNase_Ire1 788 916 - -
Tsu05g00956 920 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 67 199 IPR011047 -
Tsu05g00956 920 ProSiteProfiles Protein kinase domain profile. 497 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00956 Tsu-Chr5 8297983 8303276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00956 523 783 MAP Kinase Kinase Kinase AT3G06030 26.415 6.85e-20 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Tsu05g00956 Pkinase 3.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00956 K08852 - gmx:100785363 1122.46