Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00946 ATGGGAGGcttattacatttttttgaaTTCAATCAAGGGAGGATGGCTAAGAAAGTCCATGCTCACAAGAAACATCATGTTGATTCCGAAACTCCTCGAAATAGTCTAGATCTGCAAGAAGAAACATCTCAGAAGTATGGTTCACAAGGAGAATTACCGCACTATTATCAAGTAGAAGAAGACTGGTCTGAAAATAATCGATATTCAAACGCGGGTTCTATGAAAAAGCTAATTAATGAAGAGCTATCGACACGATCAAGCACCAGGCAAAATGCACCAAGCATTGTGGCAAGGTTGATGGGGATAGATATGATGCCGGCAGACACTAAATATGTTACTTCAtcagataaaaaaataagtgaaaatATTGGGAAGAAGTTTTCAAACAAGGGAACAAATGAAAGGAGTTCAGTTAGTTTGGAGTGTTCCAACTTTAATTCTTCTAGACATGTTGAATTTGATTCATTTCACAAAGTCATAGAGGATGACAACGATGATGGATGGGGACAGAGTTTTGGAAAACCAAGGCGACGAGAACATCCACAAGAAGAAGAATTGCAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCAGGAATGTTCAAAGTTTGCTGAAATCGGAAGTGTTTCTAACCGATTGATTTTTCAAGAGAATCTGAACAAGGAAAAGGTTGCAGTTGCACATAATACAAGTATGCAAAGGAAAGTTTTTCCTTCAAAGAGCAGAACTCTAAGTAGAGACTTCGAAGATTCCTTAATGTTGAAATCTTATAACAGATTAGACACATCTTCTCCAACCCGAATAGTTATCTTGAAGCCTGGTCCTGATAGCATATTTAATCATGAAGTGAATTGGACCAATTCATCAGGAACTTTACAAGGGAGACATAGTATAGAAGATTTTCTCGAGGAGGTGAAAGAGCGTTTGAAATGTGAACTCCAAGGAAAAACTGTTGGAAAAGGTTTTGCGGTCCGAGGAAGTGAAATTGAGACACAACACAGTAAAAAACCATCTGATCCTAAACTTATCGCTCGTCAAATAGTAAAGCAAGTCAAAGAAAATGTGACTAGAGATTCCGACTCAAATTCGGTCTGCTCAGAATCAACAAGGTCATACAAAGGTGAAGTGCAGTTCAACGGACCAAGTTTCAACGAATTTATCAGTAAAGATTCAAGGAGTTACTTGTCAGAGAAGTTAACAAATGTTGTAAAAAGTGAAATACATGATGATTCTGAGGGGAACACAAGATCAAATGCATTTGAGAATCACAGAGTTAAACTCAAGAAGACAGAAGATGTTTTGAAAAGTGCAAATGATTGGGAAATATCGAAAGAAGAAACAGAAATACAAACAGGATCTTTCAGGCATGAACAAGAcaacaatatatttttccacAGGGAGTTATGGTCTCCGAGGAACCTTGTAAGATCCTTGTCTGCTCCTGTATCAAGATCAGGAACATCATTTGGAAAGCTTCTTCTAGAGGACCGACACATTTTAACCGGTGCTCATATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCTGTTGAtgttaaaaaacagaaaaaagagagaTTCAATAATATTAAAGAAAAGGTCTCCAATTTTAGATACAGTTTTGCTCTAAGAGGGAGGATTTTTGGCAAGAGGAATCAATCAATGGTAGAATCACATGGCAATGAATACCGTCCAACAATGAGAGATATCACAAGTGGTCCGACAGTTCTTATGAACTGCGGCAACGAGAGACATGACAATTACACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCAGTGTTCATGAAGACTTTTGGAGGCGAACCGAATATATAAGTCCAATATCTACTCCTGATTTGTCGTCAAGAGATGATACTGTTATGCCACAAGTTTTCAGAGACATCAGCTCTGGTCTAAATGAACTAAGAAGACAACTGAATCAACTTGATTCTGATGATGTTGAGGACTTCGCTATGAAACAAGAACCTTCTGAGTCTGAATTGGTGCAATTAAATGATCCAGCAGAATCTTACATAAGAGATTTACTTGTTGCTTCTGGTCTATACTTTGGCTCTTGGGATAAACCTTTGTTAAGAGGCGACACATATGCAAAGCCTATTGGAAAATCTGTTTTTGAAGAAGTTGAAGAATCTCATAAGAAATTGATCAAAGAGAATGCTGAAAATTCTTTCAAGGATCATAAGCTAGAACACAAGATTTTACTTGATTTGTTAAATGAGTCACTTTCAGTCGTTCTTGGACCATCTTTGACAGTGTCTAGATTCAGGAAAAAATCACGCAACTCTTCAATGTTAGCGCCGCCTCAAGGAAAGGAACTATTGAAGTTAGTATGGGACAATATCCGTGTTTCGTTGTATCCTTCATCTGATATATCTCATTATTCACTTGATACTTTGGTGTCTCAACACTTGAGTTCAATACCTTGGTCTGACATAATCAACGACGAGATCAATATATTGGAAAGAGAGATAGAATGCCGTATAACTAatgatcttgttgaagaactcACAAAGGATTTGCTCTAA 2562 0.3661 MGGLLHFFEFNQGRMAKKVHAHKKHHVDSETPRNSLDLQEETSQKYGSQGELPHYYQVEEDWSENNRYSNAGSMKKLINEELSTRSSTRQNAPSIVARLMGIDMMPADTKYVTSSDKKISENIGKKFSNKGTNERSSVSLECSNFNSSRHVEFDSFHKVIEDDNDDGWGQSFGKPRRREHPQEEELQKFKKEFEAYQAARFQECSKFAEIGSVSNRLIFQENLNKEKVAVAHNTSMQRKVFPSKSRTLSRDFEDSLMLKSYNRLDTSSPTRIVILKPGPDSIFNHEVNWTNSSGTLQGRHSIEDFLEEVKERLKCELQGKTVGKGFAVRGSEIETQHSKKPSDPKLIARQIVKQVKENVTRDSDSNSVCSESTRSYKGEVQFNGPSFNEFISKDSRSYLSEKLTNVVKSEIHDDSEGNTRSNAFENHRVKLKKTEDVLKSANDWEISKEETEIQTGSFRHEQDNNIFFHRELWSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAHIRRKLEAVETMSVDVKKQKKERFNNIKEKVSNFRYSFALRGRIFGKRNQSMVESHGNEYRPTMRDITSGPTVLMNCGNERHDNYTEVPPSPASVCSSVHEDFWRRTEYISPISTPDLSSRDDTVMPQVFRDISSGLNELRRQLNQLDSDDVEDFAMKQEPSESELVQLNDPAESYIRDLLVASGLYFGSWDKPLLRGDTYAKPIGKSVFEEVEESHKKLIKENAENSFKDHKLEHKILLDLLNESLSVVLGPSLTVSRFRKKSRNSSMLAPPQGKELLKLVWDNIRVSLYPSSDISHYSLDTLVSQHLSSIPWSDIINDEINILEREIECRITNDLVEELTKDLL 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00946 853 Pfam DUF761-associated sequence motif 90 107 IPR032795 -
Tsu05g00946 853 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 237 - -
Tsu05g00946 853 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 233 852 - -
Tsu05g00946 853 MobiDBLite consensus disorder prediction 19 51 - -
Tsu05g00946 853 MobiDBLite consensus disorder prediction 36 50 - -
Tsu05g00946 853 Pfam Domain of unknown function (DUF4378) 682 847 IPR025486 -
Tsu05g00946 853 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 233 852 - -
Tsu05g00946 853 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 237 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00946 74 852 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 41.708 5.71e-152 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00946 - - gmx:100779720 1191.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00946 05 8227685 8232137 Tsu05g00946 05 8227685 8232137 ECH