Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00938 ATGGGTATATGTTTTGCTTCACTCTCTCGCCAATCACCACCCTCTTCTCTCAATATTCCCCACACTTCAGGTTCAAGGGGTAACAATAGTCAAGAGGACAATACTAAGAAAGAGTCGTCATCATGTAATAAAAGTAAAGAAGAAGGAAGCACAACTATAAGTGGGAAGTTTCTAGAAATTCCAAATTTGAAGGAGTTTAGTTATGGAGATTTGAAAGTTGCCACTAAGAATTTCAAGTCAGATGCATTGCTTGGTGAAGGTGGTTTTGGTAAAGTTTACAAAGGTTGGTTGAATGCTGAGACACTCACCCCTGCCAAAGCTGGTTCTGGAATGATAGTGGCCATCAAGAAATTGAATTCAGATAGTGTGCAAGGTGTTCAAGAATGGCAGTCAGAAATAAACTTTTTAGGAAGGATTTCTCACCCCAATTTAGTCAAGCTATTGGGTTATTGTAGGGACGGTGATGAATTTCTCCTTGTGTACGAGTTCATGCCAAGGGGAAGCTTAGAGAGCCATCTCTTTAAAAGAAATCCTAAACCACTTTCGTGGGACACAAGACTCAAAATCACTATAGATGCAGCTCGAGGCTTGGCATTCTTGCACTCATCAGAAAAGCAAATCATATATAGAGATTTCAAAGCTTCCAATATACTTCTTGATGGGAATTATAATGCAAAGATTTCAGATTTTGGGTTGGCGAAATTTGGGCCATCCGGAGAAAATTCTCACGTGACTACTCGAATCATGGGCACGTATGGGTATGCTGCTCCGGAATACATTGCAACAGGTCATTTATATGTGAAGAGCGATGTTTATGGATTTGGGGTGGTGCTGCTTGAAATGTTGACAGGGTTGAAAGCACTTGATATAAAAAGGCCTATGGAGAAGCAAAATCTAGTTGAATGGATGAAGCCTTCTCTTACTGATAAAAGAAAGTTAAAAGGTAACATTGTAGATTATAGGTTAGAGGGTCAATATTCATCAAAAGCAGCATTTGAAATAGCTCAGCTTATTCTTAAATGCCTTGAATCTGACCCTAAAAAACGTCCTTCTATGGAAGATGTTTTGGGGACATTAGAAGGCATAAACGCTATCAAGGATAAGAGAAGAATATCAAAGAATCATTGTACTAAGTCTGCAACTATGTAA 1149 0.389 MGICFASLSRQSPPSSLNIPHTSGSRGNNSQEDNTKKESSSCNKSKEEGSTTISGKFLEIPNLKEFSYGDLKVATKNFKSDALLGEGGFGKVYKGWLNAETLTPAKAGSGMIVAIKKLNSDSVQGVQEWQSEINFLGRISHPNLVKLLGYCRDGDEFLLVYEFMPRGSLESHLFKRNPKPLSWDTRLKITIDAARGLAFLHSSEKQIIYRDFKASNILLDGNYNAKISDFGLAKFGPSGENSHVTTRIMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLKALDIKRPMEKQNLVEWMKPSLTDKRKLKGNIVDYRLEGQYSSKAAFEIAQLILKCLESDPKKRPSMEDVLGTLEGINAIKDKRRISKNHCTKSATM 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00938 382 PANTHER OS01G0588500 PROTEIN-RELATED 38 374 - -
Tsu05g00938 382 SUPERFAMILY Protein kinase-like (PK-like) 54 360 IPR011009 -
Tsu05g00938 382 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 38 374 - -
Tsu05g00938 382 ProSitePatterns Protein kinases ATP-binding region signature. 84 117 IPR017441 GO:0005524
Tsu05g00938 382 CDD STKc_IRAK 84 362 - -
Tsu05g00938 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Tsu05g00938 382 Pfam Protein tyrosine and serine/threonine kinase 81 357 IPR001245 GO:0004672|GO:0006468
Tsu05g00938 382 MobiDBLite consensus disorder prediction 8 30 - -
Tsu05g00938 382 Gene3D Transferase(Phosphotransferase) domain 1 164 380 - -
Tsu05g00938 382 Gene3D Phosphorylase Kinase; domain 1 62 163 - -
Tsu05g00938 382 MobiDBLite consensus disorder prediction 1 49 - -
Tsu05g00938 382 ProSiteProfiles Protein kinase domain profile. 78 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00938 Tsu-Chr5 8140864 8143839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00938 22 359 Glycoside Hydrolase AT3G07070 45.190 2.83e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu05g00938 PK_Tyr_Ser-Thr 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00938 - - gmx:100777578 520.39