Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00935 ATGGACAAAAACGTttccaccaacaacaacaacaacaacaactcatCAGCACCCAATACCCCTCCACACAACCCCAATGAAACAAACCCTATCGACGAGGGTTTGGAAACAATTATCAAAACCTCTGAAGAGGTTTTGGCAGAATTGAACGCTTCCAGTGATGAGGAGATCAATGAAAATGGTGATGGTGGCGCTAATCAAGATGGTGGGGACCAAGGTAGGGTTCCTAGGGTTATGGTTGTTGCTTTGACTGCCGACGGTTCAAATACGGCTGTGGCTGAGAGAGTTGGTGGAAATGATCGTGTCCAACCTTTAATTAAGAAGAGAAAGTACAATCCAGTTAGAGACCCTCCGGCTGGAAAACCTACATGTCCAGAATGTAAGAAGGAGTTTGCATCATGGAGGGCTGCTTTCGGGCATATGCGCAAGCATCCCGAGCGTGCGCACCGTGGATTCTTTCCTCCTCCTACTTTTACCCCCACTGCACCGGTGGCTGGGATCCATGTGACTGAGGACAATGGTGGTCCAAGCAAGGTGAATGAAGGAGTGTTAGAAGCGGTTCGTGGACTTGTTATTGACCTAAATAGGTCTATTGGAGCGCCAACGGAGTCCTCTGCTGGCGGCAGCGGTACGAGTGAGAGAAATGAAGAAGCACCTACCCCTGCACCGGAAAATGAAGAGGGTAGAatgaaaaatgtgtttgactTGAACAAGTTGCCACcaaatgaagatgatgatgataaaacTCAAGAGAAATGA 759 0.4427 MDKNVSTNNNNNNNSSAPNTPPHNPNETNPIDEGLETIIKTSEEVLAELNASSDEEINENGDGGANQDGGDQGRVPRVMVVALTADGSNTAVAERVGGNDRVQPLIKKRKYNPVRDPPAGKPTCPECKKEFASWRAAFGHMRKHPERAHRGFFPPPTFTPTAPVAGIHVTEDNGGPSKVNEGVLEAVRGLVIDLNRSIGAPTESSAGGSGTSERNEEAPTPAPENEEGRMKNVFDLNKLPPNEDDDDKTQEK 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00935 252 MobiDBLite consensus disorder prediction 1 73 - -
Tsu05g00935 252 MobiDBLite consensus disorder prediction 1 31 - -
Tsu05g00935 252 MobiDBLite consensus disorder prediction 198 218 - -
Tsu05g00935 252 MobiDBLite consensus disorder prediction 219 252 - -
Tsu05g00935 252 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 6 251 - -
Tsu05g00935 252 MobiDBLite consensus disorder prediction 198 252 - -
Tsu05g00935 252 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 6 251 - -
Tsu05g00935 252 ProSitePatterns Zinc finger C2H2 type domain signature. 124 144 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00935 111 162 C2H2 Transcription Factor Family AT4G35280 54.545 1.93e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tsu05g00935 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00935 - - mtr:MTR_5g023910 197.978