Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00927 ATGAAGGTTTCTGAGGAGAGTAGTTCTAACCCAAATTTTCAAGGAGGGTTAGATGCTAAAAAGATTGGGCAAAACAGAAGGGCGTTGGGAGTGATTAATCAGAATCTGGTTGTGGAAGGGAGACCATATCCATGTGTTGTTAACAAAAGAGCATTGTCAGAAAGAAATGGTGTTTGTGAGAAGAAGCAAGCGGATCCGGGGCATCGACCCATTACTAGGAGGTTTTCTGCAAAAATTGCTGGCACACAGAAATCTAAAGCTGAGGGAACTACCACAAGGTCAAACTTGGGAAATTCAAATGGATTTGCAGATAGTatatttgttgatgatgaacACAAGCCGGCGGAAGATCAGCCAGTGCCAATGGCTTTAGAGCAAATGGAACCAACGCTTGTTGGATCAGATCAGATGGAGGAAGTTGAGATGGAGGATATACCGGAAGAGCCTGTTATGGACATCGACACTTCTGATGAAAATAACCCTCTCGCAGTTACTGAATATATTGAAGATCTTTATTCTTACTACAGAAAAGTTGAGAATACTGGCTGTGTCTCACCAAATTATATGGCACAACAATTTGACATTAATGAAAGGATGAGGGCCATACTCATTGACTGGCTTATTGAGGTGCACGACAAATTCGACCTCATGCATGAGACATTGTTTCTGACAGTTAATCTGATAGACAGATTTTTGGAAAAGCAATCAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTAGTGGCAATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCTGTCGTCGGAGATCTAATTCTTATATCAGACCGAGCTTACACCCGGAAAGAAGTTCTGGATATGGTAAACATTTGTTTCCTTTGCTTATTGTCACAACCTTTACATTTACAGCATTTGTGGAACCACTCTATGACAAATAAGATTTAA 933 0.403 MKVSEESSSNPNFQGGLDAKKIGQNRRALGVINQNLVVEGRPYPCVVNKRALSERNGVCEKKQADPGHRPITRRFSAKIAGTQKSKAEGTTTRSNLGNSNGFADSIFVDDEHKPAEDQPVPMALEQMEPTLVGSDQMEEVEMEDIPEEPVMDIDTSDENNPLAVTEYIEDLYSYYRKVENTGCVSPNYMAQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYTRKEVLDMVNICFLCLLSQPLHLQHLWNHSMTNKI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00927 310 PANTHER CYCLINS 17 287 IPR039361 -
Tsu05g00927 310 MobiDBLite consensus disorder prediction 83 101 - -
Tsu05g00927 310 PANTHER CYCLIN-B2-1 17 287 - -
Tsu05g00927 310 SMART cyclin_7 205 289 IPR013763 -
Tsu05g00927 310 Pfam Cyclin, N-terminal domain 170 283 IPR006671 -
Tsu05g00927 310 ProSitePatterns Cyclins signature. 200 231 IPR006671 -
Tsu05g00927 310 CDD CYCLIN 199 286 IPR013763 -
Tsu05g00927 310 SUPERFAMILY Cyclin-like 159 283 IPR036915 -
Tsu05g00927 310 MobiDBLite consensus disorder prediction 59 101 - -
Tsu05g00927 310 Gene3D - 184 286 - -
Tsu05g00927 310 Gene3D - 170 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00927 Tsu-Chr5 8050611 8054190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00927 12 283 Core Cell Cycle Gene Families AT1G20610 53.191 1.18e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00927 K21777 - gmx:100798068 438.728