Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00900 ATGGGAGGACACACAAGTGTTGTTCAACCAAAATTTTCAAACTTCCGTTTAAAGGGGAATTTAGAGGACACTATTGTTGGAGTCCCAACTTCAGTGCCAGTGCGTGTAGCACACGAGCTTCTTCTAGCTGGTCATAAGTATTTGGATGTAAgGACCCCTGAAGAGTTTAATGCTGGACATGCTCCTGGTGCAATTAACATACCTTATATGTATAGAGTTGGATCAGGGATGACAAAGAACAGCAATTTTGTTAAAGAGGTCTCCTCAAAATTtagaaaagaagatgaaattaTTGTTGGATGTCAGCTTGGCAAAAGATCTATGATGGCTGCCACTGACTTGTTAGCTTCTGGATTCACTGGACTTACAGACATAGCAGGTGGTTATGCTGCTTGGACCCAAAATGGACTTCCTACAGAACAATGA 426 0.4014 MGGHTSVVQPKFSNFRLKGNLEDTIVGVPTSVPVRVAHELLLAGHKYLDVRTPEEFNAGHAPGAINIPYMYRVGSGMTKNSNFVKEVSSKFRKEDEIIVGCQLGKRSMMAATDLLASGFTGLTDIAGGYAAWTQNGLPTEQ 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00900 141 Pfam Rhodanese-like domain 47 134 IPR001763 -
Tsu05g00900 141 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 17 141 - -
Tsu05g00900 141 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 27 140 IPR036873 -
Tsu05g00900 141 SMART rhod_4 31 138 IPR001763 -
Tsu05g00900 141 CDD RHOD 48 132 - -
Tsu05g00900 141 ProSiteProfiles Rhodanese domain profile. 41 141 IPR001763 -
Tsu05g00900 141 Gene3D - 17 140 IPR036873 -
Tsu05g00900 141 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 17 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00900 Tsu-Chr5 7807966 7810197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00900 31 138 Sulfurtransferasese or Rhodanese AT5G66170 46.364 5.22e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00900 - - aprc:113868825 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00900 05 7807966 7810197 Tsu04g03531 04 44488088 44489889 PCT