Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00899 ATGGTGATCGAGAACGACATTGAAAGTTGCGGAAGTAGAGCGGTTCAATCACACGCGAATCCACGTCATCACCGTCAAAAGCTTGAAGTATATAATGAAGTTCTTCGTCGAATTCTTGATTCCGATTCCGAAGAAGCTCATGTTCCTGGTTTCGATGATCAACTTTGGCTTCACTTCAATCGTCTTCCTGCTAGGTATGCATTGGATGTGAATGTGGAAAGAGCTGAAGATGTTCTTGCTCATAAAAGATTGCTCGAGTTGGCGAAGGATCCAGCTAATCGTCCGGCATTTCAAGTTCGCTTAGTACAGGTATATCCTTTTGGTAGTACACATTATAATGATTCTTCGGTCCATTCAGATCGTTCTGAGAAAGATGATGCACAAAGTTCTCTTAACTATTCTTTAAAGCAGGGAATTCATCCACCACCTACGTTTGGTTCTTCCTCTAACCTTGAAGCTCTTgcacttcaaacaaataaaaataacattgaaGATGGAGACAATGCTATGGGCGTGACACCAAATTTTAACCGGCCCATGCACGAGATTACCTTTTCAACAATTGACAAGCCTAAACTCCTTAGTCAGTTAACTTTAATTCTTGGTGAACTTGGACTGAATATTCAAGAAGCTCATGCATTTTCCACCTCTGATGGATTTTCCCTGGATGTATTTGTTGTTGAGGGATGGCCTAATGAGGAAACTGAGGAGCTTAAAGGTGTGTTGGAAAAGGAAATTTGGAAGGTTAAGGACCAATATCTGTCAAATCAGGGCATACTTTATTCCGTAAATGATCAATACCAAACGAGGACGGAATCCTCCCCTGATTGCATACAAATACCATCTGATGGAGCTGATGTCTGGGAAATTGATCCCAGCCAGctaaaatatgaaaacaaagTTGGCTCTGGATCATTTGGCGACTTGTTCAGAGGCAGTTATTGCAGTCAAGATGTGGCTATCAAAGTTCTTAAGCCTGAACGCATAAGTACAGATATGCTGAAAGAGTTTGCGCAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAACGTTGTTCAGTTCATTGGTGCATGTACTCGGCCACCAAATCTTTGTATTGTTACTGGTAAATAG 1116 0.4005 MVIENDIESCGSRAVQSHANPRHHRQKLEVYNEVLRRILDSDSEEAHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLELAKDPANRPAFQVRLVQVYPFGSTHYNDSSVHSDRSEKDDAQSSLNYSLKQGIHPPPTFGSSSNLEALALQTNKNNIEDGDNAMGVTPNFNRPMHEITFSTIDKPKLLSQLTLILGELGLNIQEAHAFSTSDGFSLDVFVVEGWPNEETEELKGVLEKEIWKVKDQYLSNQGILYSVNDQYQTRTESSPDCIQIPSDGADVWEIDPSQLKYENKVGSGSFGDLFRGSYCSQDVAIKVLKPERISTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTGK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00899 371 SUPERFAMILY ACT-like 180 245 IPR045865 -
Tsu05g00899 371 Gene3D Phosphorylase Kinase; domain 1 285 370 - -
Tsu05g00899 371 SUPERFAMILY Protein kinase-like (PK-like) 277 369 IPR011009 -
Tsu05g00899 371 Pfam Protein tyrosine and serine/threonine kinase 295 369 IPR001245 GO:0004672|GO:0006468
Tsu05g00899 371 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Tsu05g00899 371 CDD ACT_TyrKc 180 246 - -
Tsu05g00899 371 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 15 369 - -
Tsu05g00899 371 ProSiteProfiles Protein kinase domain profile. 295 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00899 371 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 369 - -
Tsu05g00899 371 ProSiteProfiles ACT domain profile. 182 262 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00899 Tsu-Chr5 7796629 7802617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00899 2 369 MAP Kinase Kinase Kinase AT4G35780 64.075 1.83e-158 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tsu05g00899 PK_Tyr_Ser-Thr 1.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00899 - - gmx:100816767 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03402 04 43262346 43263389 Tsu05g00899 05 7796629 7802617 PCT