Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00893 ATGGCTAGTAACAATAAGGAGAAGGAGAAAGACATTGAGTTTTtgtttattgatgatgatgtagAGGAAGGTGAACAACATGAAAAGATAGTGAGTGAGAGTAACAGTGAAATTGATGgcagtgatgatgatgatgagggaAATCATAGGGATCAACCTCAATCTTTTACTTCTCAGATATGGCCTCAAAGTTACAAAGAAACTACAGATTCTTACACAATTGCTACAGCTCCAAATTTTGGGTCAATTGTAAGAGGACCAAGTTTTATTTATTCGAGTTTTACCAATCGTTCAAAGAGTAACTTAGAACTAGATGGAAAGACTCCTTTTCTATCATCAGGTATTGATAAAGGCACTGCTCAAACAACAACATGGTGGGAGAAAGGTTCAATGCAAAATGTTGTTGGAGAAATGCCTATTGGTTATGGTTGCAGCCTTACTCAAACAGTTTTCAATGCGGTTAATGTGATGGCTGGAGTTGGACTTTTGTCTACACCTTATACAGTGCAACAAGCCGGTTGGGCGGGCCTGGTGGTGATGCTTATTTTTGCAGGTGTTTGTTGTTATACAGCCACCCTTATGAAACGCTGCTTTGAAAGCAGAGAAGGACTTACTAGCTATCCAGATATAGGAGAAGCTGCATTCGGTAGATATGGCCGTATTTTTGTATCTatcattttgtacactgaattATATACATATTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTGGTCTGTTTCCGGGAACATCCTTAGATTTAGGTGGTCTCCATTTGGATTCCATGCACTTGTTTGGAATTCTGATTGCGCTTATTATTCTCCCTACTGTTTGGTTGAAGGATCTCCGAATAATTTCGTATCTATCAGTTGGAGGGATTGTAGCGACATTATTGATTATCATTTGTGTGTTCTCTGTCGGGACAACCGTTGGATTCCATCATACTGGCCAAGTGGTGAATTGGAGTGGCATTCCGTTTTCTATCGGTGTCTACGGATTTTGCTTTGCAGGACATTCGGTCTTTCCAAATATATACCAGTCTATGGCTGACAAAAAACAATATACAAAAGCATTGATAATATGTTTTGTTTTGTGTATTTTGATATATGGAAGCGTTGCAGTCATTGGATTTCTCATGTTTGGTGATAGCACTTTGTCTCAGATAACATTGAATATGCCGACAGGTGCATTTGCTTCCAAAGTTGCGCTGTGGACAACAGTAATAAATCCATTGACTAAATATGCTTTGTTGATGAATCCGCTCGCAAGGAGTCTAGAGGAATTGCTTCCAAATAGAGTTTCAAGTACTTACTGGTGTTTTATTCTTCTTAGAACGGCACTTGTTGCATCTACAGTTTGTGCGGCTTTTCTGATTCCATTTTTTGGACTTGTGATGGCTTTGATCGGATCTCTCTTCAGCATGCTTGTGTCAGTGATAATGCCTAGTTTATGCTTTTTAAAAATTGTGGGGAAAAAAGCTACAAAGGCACAGGTTATCGCGAGCCTTACAATTGCTGCAGCCGGAATCATTTGTGGACTCATTGGATCATATTCCTCTTTGATGAATATTGCTGATAGTTACTAA 1593 0.3779 MASNNKEKEKDIEFLFIDDDVEEGEQHEKIVSESNSEIDGSDDDDEGNHRDQPQSFTSQIWPQSYKETTDSYTIATAPNFGSIVRGPSFIYSSFTNRSKSNLELDGKTPFLSSGIDKGTAQTTTWWEKGSMQNVVGEMPIGYGCSLTQTVFNAVNVMAGVGLLSTPYTVQQAGWAGLVVMLIFAGVCCYTATLMKRCFESREGLTSYPDIGEAAFGRYGRIFVSIILYTELYTYCVEFITLEGDNLTGLFPGTSLDLGGLHLDSMHLFGILIALIILPTVWLKDLRIISYLSVGGIVATLLIIICVFSVGTTVGFHHTGQVVNWSGIPFSIGVYGFCFAGHSVFPNIYQSMADKKQYTKALIICFVLCILIYGSVAVIGFLMFGDSTLSQITLNMPTGAFASKVALWTTVINPLTKYALLMNPLARSLEELLPNRVSSTYWCFILLRTALVASTVCAAFLIPFFGLVMALIGSLFSMLVSVIMPSLCFLKIVGKKATKAQVIASLTIAAAGIICGLIGSYSSLMNIADSY 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00893 530 MobiDBLite consensus disorder prediction 1 62 - -
Tsu05g00893 530 Pfam Transmembrane amino acid transporter protein 145 523 IPR013057 -
Tsu05g00893 530 MobiDBLite consensus disorder prediction 1 15 - -
Tsu05g00893 530 Gene3D Amino acid/polyamine transporter I 143 529 - -
Tsu05g00893 530 PANTHER OS05G0424000 PROTEIN-RELATED 36 528 - -
Tsu05g00893 530 PANTHER AMINO ACID TRANSPORTER AVT1A 36 528 - -
Tsu05g00893 530 MobiDBLite consensus disorder prediction 22 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00893 Tsu-Chr5 7724994 7729264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00893 3 465 Amino Acid or Auxin Permease AAAP Family AT2G41190 62.526 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00893 K15015 - gmx:100790344 820.076