Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu05g00888 | ATGACAGGAGCTTTGATAGGTCAAGAAACTGAGAGTGGTTTCATTCGAGGTGCTGCTGTTGGTGCTATATCAGGAGCTGTTTTTTCCATTGAAGTTTTTGAATCTTCTCTTGTTCTTTGGCATTCTGATGAATCTGGGATTGGTTGTCTTTTATATTTGATTGATGTTATTGCTAGCTTGTTGAGTGGGAGACTTGTGCGTGAGAGGATCGGTCCGGCCATGTTGAGTGCAGTTCAAAGTCAGATGGGTGCTGTTGAAACAAGCTTTGATGAGGTTCAAAACATCTTTGACATTGGTGGTTCCAAAGGGTTATCCGTAGATTCAGTTGCGAAAAtcccaaaaatcaaaatcaccgCGGACAATATGGATGCATCAGGGGAGAAAGTTTCGTGTTCAGTTTGTCTCCAGGACTTTCAACTTGGAGAGACAGTTAGAAGTTTACCTCATTGTCATCACATGTTTCACCTTCCTTGCATAGATATGTGGCTCTTAAGGCATGGTTCTTGCCCATTATGCAGAAGGGATCTGTGA | 531 | 0.4087 | MTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWHSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETSFDEVQNIFDIGGSKGLSVDSVAKIPKIKITADNMDASGEKVSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDMWLLRHGSCPLCRRDL | 176 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu05g00888 | 176 | ProSiteProfiles | Zinc finger RING-type profile. | 131 | 173 | IPR001841 | - | |
Tsu05g00888 | 176 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 1 | 176 | IPR044523 | - | |
Tsu05g00888 | 176 | SUPERFAMILY | RING/U-box | 124 | 176 | - | - | |
Tsu05g00888 | 176 | Pfam | Ring finger domain | 130 | 173 | IPR001841 | - | |
Tsu05g00888 | 176 | SMART | ring_2 | 131 | 172 | IPR001841 | - | |
Tsu05g00888 | 176 | CDD | RING-H2_PA-TM-RING | 131 | 173 | - | - | |
Tsu05g00888 | 176 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 94 | 176 | IPR013083 | - | |
Tsu05g00888 | 176 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE, YMGG-LIKE GLY-ZIPPER-RELATED | 1 | 176 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu05g00888 | Tsu-Chr5 | 7675158 | 7676633 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu05g00888 | 1 | 176 | C3H Transcription Factor Family | AT5G66070 | 81.818 | 8.94e-102 | 290 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu05g00888 | - | - | mdm:103401042 | 325.479 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu05g00888 | 05 | 7675158 | 7676633 | Tsu04g03559 | 04 | 44730912 | 44732620 | PCT |