Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00870 ATGGAGAAACATGAGATACAAAATTGGTTTGTAAGAGCAAAACCATTCATAGCAGTTTTGTTTTTGCAATTTGGATATGCAATTATGGATGTTTTATCAAAGGCTGCAATGAATAAGGGAATGAGCAATTATGTATTTATTGTGTATCGTCATGTTGTAGCATTCATTTTCATAACCCCTTTTGCACTCTATTTTGACaagaaagtaaggactaaaatgaCAATGTCAATCTTCATGAAGATAGTGTTGCTCAGCTTTCTAGAACCTGTTATTGgtcaaaatttgtattttttagggaTGAAGTACACAACAGCAACCTTTGCAGCTGCCATGACCAATATCCTTCCTGCCAGTGCCTTTATCTTGGCCTGCATTTTTAGGCTTGAGAAGATAAAAGTAAAATGTATAAGGAGCCAAGCAAAAGTGGTGGGAACCATAGCATCTGTTGCAGGTGCAATGGTAATGACTCTAATTAAAGGTCCTGTACTTTTAGGGACATTTGGAGGCAATAGTCATTACCAGAATAGTGATGACACTGATACTCAACATATATTAGTTGGCTCTATAATGATTGCATTAGGATGCTTTAGTTGTGCTTGTTTTGTGATCCTTCAAGCTATTACCCTTAAAACCTACCCTGCACCACTTTCACTTGCCTCGTGGATATGTTTTTTGGGCACACTTGAAACTGCAGTAGTGGCTATGATTATGGAATGGTGTAATCCTTCAGTTTGGTATATAAAATGGGATATGAGATTGTTGTCTATTGTTTACACTGGTATAGTCTGCTCAGGGGTGTTATATTTTGTTCAAGGAGTAGTGGTGAAATCTAGAGGCCCAGTATTTGTAACAGCAGTTAGTCCTTTATGCACAGTAATTGTTGCAATAATGGGATACTTCATTTTGGCTGAAGAATTGTTCCTTGGAAGGGTTATAGGTGCAATTATCACTTGTTTGGGCCTATATCTTGTTGCTTGGGGCAAAAGCAAAGATTACACTCCATCAGAACCAGTTATTCAAGAATTTATATTTTCAGCTGATGAAGGCATTGTTAAGAATGAACATTTTGCTCAAGAGATCATCACTATTCAATAA 1095 0.3571 MEKHEIQNWFVRAKPFIAVLFLQFGYAIMDVLSKAAMNKGMSNYVFIVYRHVVAFIFITPFALYFDKKVRTKMTMSIFMKIVLLSFLEPVIGQNLYFLGMKYTTATFAAAMTNILPASAFILACIFRLEKIKVKCIRSQAKVVGTIASVAGAMVMTLIKGPVLLGTFGGNSHYQNSDDTDTQHILVGSIMIALGCFSCACFVILQAITLKTYPAPLSLASWICFLGTLETAVVAMIMEWCNPSVWYIKWDMRLLSIVYTGIVCSGVLYFVQGVVVKSRGPVFVTAVSPLCTVIVAIMGYFILAEELFLGRVIGAIITCLGLYLVAWGKSKDYTPSEPVIQEFIFSADEGIVKNEHFAQEIITIQ 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00870 364 PANTHER WAT1-RELATED PROTEIN 10 347 IPR030184 GO:0016021|GO:0022857
Tsu05g00870 364 PANTHER WAT1-RELATED PROTEIN 10 347 - -
Tsu05g00870 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 329 - -
Tsu05g00870 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Tsu05g00870 364 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Tsu05g00870 364 Pfam EamA-like transporter family 17 156 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00870 Tsu-Chr5 7528800 7531291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00870 1 332 Nodulin-like Gene Family AT2G37460 60.778 2.95e-148 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00870 - - cam:101496299 497.278