Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00869 ATGAAGTTGCACTTTCAAAACATTCTTTTTGTATCACCTCTTGTCACTCTTTTCTGTCTTGCTACAATTCTTATCTCTCTACATTATGGTAATGCTTTGAAACTACCAAACAATGAAACAGTCCCAGCACTCATTGTGTTTGGTGACTCTATAGTTGACTCAGGTAATAACAACTACATCAAAACTGTGTTCAAGTGCAATTTTCTACCTTATGGTAAAGACTTTGGTGTTGGAAATCAACCAACTGGAAGATTCAGCAATGGTTTAGTCCTTTCAGATATCATTGcTTCAAAATTTGGAGTCAAGAAGCTTTTGCCAGCTTATCTTGATCCAAATTTGCAACTTGAAGATCTTCTAACAGGTGTAAGCTTTGCCTCTGGTGGTGCTGGATATGATCCTCTAACTTCTAAATTAGCAtCTGTGATATCATTATCAGATCAATTAAACAAGTTCAAGGAGTACAAAAGTATGATAAATGAAGCAGTTGGAGAAGAGAGTATGAACATGATAATATCAAAGAGTGTATATATTATTTGCATAGGAAGTGATGACATTGCCAATACTTATACTCAAACACCATATAGGAAATTCAACTATGATATTCCATCATACACAGACTTATTGGCTTCACATTCCTCAAACTTCTTGCAGGAACTATATGATTTAGGAGCTAGAAGGATTGGAGTATTAGGTATGCCAAATATAGGGTGTGTACCCTCACAGAGAACAATTGGAGGAGGCATGGATAGAGGATGTTCAGAATCTGAAAACACAGCAGCAAGACTCTTCAACTCCAAACTAGTATCTCAATTGGATGCCTTTCAAACTAAATTTCCAGAGGCTAAGTTTGTCTACCTTGATATTTACAATCCATTGATGAATATGGTTCAAAACCCTGCTAAATATGGTTTTGAAGTAGCAGACACAGGATGTTGTGGAACAGGAGACATAGAAGTAAGCATATTGTGTAACCGTTACAGCGTAGACATATGTCCAAACCCTTCAAGCTATATATTCTGGGACAGTTACCATCCTACACAAGAAGCATATAATTTGCTTTGTTCAATGGTCCTTGATGACAAAATCAATGACTTCTTCTAG 1101 0.3633 MKLHFQNILFVSPLVTLFCLATILISLHYGNALKLPNNETVPALIVFGDSIVDSGNNNYIKTVFKCNFLPYGKDFGVGNQPTGRFSNGLVLSDIIASKFGVKKLLPAYLDPNLQLEDLLTGVSFASGGAGYDPLTSKLASVISLSDQLNKFKEYKSMINEAVGEESMNMIISKSVYIICIGSDDIANTYTQTPYRKFNYDIPSYTDLLASHSSNFLQELYDLGARRIGVLGMPNIGCVPSQRTIGGGMDRGCSESENTAARLFNSKLVSQLDAFQTKFPEAKFVYLDIYNPLMNMVQNPAKYGFEVADTGCCGTGDIEVSILCNRYSVDICPNPSSYIFWDSYHPTQEAYNLLCSMVLDDKINDFF 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00869 366 SUPERFAMILY SGNH hydrolase 44 359 - -
Tsu05g00869 366 Pfam GDSL-like Lipase/Acylhydrolase 45 353 IPR001087 GO:0016788
Tsu05g00869 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 365 - -
Tsu05g00869 366 PANTHER GDSL ESTERASE/LIPASE EXL3 3 365 - -
Tsu05g00869 366 Gene3D SGNH hydrolase 29 361 IPR036514 -
Tsu05g00869 366 CDD SGNH_plant_lipase_like 42 360 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00869 Tsu-Chr5 7515753 7528462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00869 38 360 Pollen Coat Proteome AT1G75910 41.104 1.34e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00869 - - ahf:112723705 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00869 05 7515753 7528462 Tsu04g03542 04 44630513 44632619 PCT