Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00859 ATGGCTACTCAAAACCCTAATCCAAGAAATTCACTCTACCCTCAAGTTATCGATTCCAATCCCGATGCTCCTTCTCAACTCCATCACACCAATCCTTCAAATCTCTACCCTTCTATCGACTTCAACGATCTCGTTCAAAATCTCTTCCCCGATGACATCACCGCCGGAAGCAATCCTACTTCACCTTCTGCACCGCTGGAGAAAATTACAGAAGAAGAAATCCTCGTCAAGATCCCCGGTGCCATTCTTAACCTAATTGATAGAGATTACAGTGTCGAACTCGCTTCCGGTGACTTCACCGTCGTCCGTCTCCGTCAAGGTGAAAATTCCATCGCTGTATATGCTCGTATCGCTGATGAAATCCAATGGCCGCTTGCGAAAGACGAAACAGCTGTCAAAGTCGATGACTCTCACTACTTTTTCTCATTCCGTGCACCTAAGGATCCCGATTCAGACGAAGAAGAAGAGGATCGGAGTAAGAAGAACAAATTCGACTCCGATTTGTTAAGCTATGGTTTAACAATCGCGTCGAAAGGTCAAGAGAAGTTGTTGAAGGAGTTGGATGTGATTTTGGAGAATTGCAGTAGCTTTTCTGTGCAGAAGGTTACGGAGAAGGCGAAGAAAGGAGAGGCCTTAGATGGATCGATGGCGAAGGAGGTTTCACCGAAGGATTTGGAgtcgaagaagaagaaggaggtaATGGAAGGACAATGTGCGGCGTATTGGACTACATTGGCTCCTAATGTGGAGGAATATAGTGGAAGTGCTGCGAAGTTGATAGCTTCGGGTTCTGGACATGTGATTAAGGGGATTTTGTGGTGTGGTGATGTGACTATGGATAGGTTGCAATGGGGGAATCAGGTTATGAAGAAAAGGTTGGCTGCTGGTTCGCGTGCTGCTGAGATTAGTCCTCAAACCTTGAAGCGGATTAAAAGGGTCAAGAGAGTGACCAAAATGACAGAGAAAGTTGCAAATGGATTGCTCTCTGGAGTCGTGAAAGTGTCTGGATTTTTCACCAGTTCAGTGGTAAACTCGAAGGCTGGAAAGAAGTTTTTCAGCCTTTTACCAGGGGAAGTTGTGCTTGCATCATTGGATGGATTCAGTAAAGTGTGTGATGCTGTTGAAGTAGCCGGAAAAAATGTCATGTCAACATCATCCACTGTGACAACTGAACTTGTCGATCACAGATACGGAGAACAAGCTGCACACGCTACAAGTCAAGGGCTTGATGCTGCTGGTCATGCTTTGGGTACTGCATGGGCTGCATTTAAGATTAGGAAGGCTATTAATCCTAAGAGTGTTCTTAAACCTACCACCATAGCCAAAACTGCTGCTAAAGCTGCAGCTTCTGATTTTAAGTCAAGTAAGTCCAAGTCCAAGAGCAAGTAA 1389 0.4449 MATQNPNPRNSLYPQVIDSNPDAPSQLHHTNPSNLYPSIDFNDLVQNLFPDDITAGSNPTSPSAPLEKITEEEILVKIPGAILNLIDRDYSVELASGDFTVVRLRQGENSIAVYARIADEIQWPLAKDETAVKVDDSHYFFSFRAPKDPDSDEEEEDRSKKNKFDSDLLSYGLTIASKGQEKLLKELDVILENCSSFSVQKVTEKAKKGEALDGSMAKEVSPKDLESKKKKEVMEGQCAAYWTTLAPNVEEYSGSAAKLIASGSGHVIKGILWCGDVTMDRLQWGNQVMKKRLAAGSRAAEISPQTLKRIKRVKRVTKMTEKVANGLLSGVVKVSGFFTSSVVNSKAGKKFFSLLPGEVVLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVDHRYGEQAAHATSQGLDAAGHALGTAWAAFKIRKAINPKSVLKPTTIAKTAAKAAASDFKSSKSKSKSK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00859 462 MobiDBLite consensus disorder prediction 1 32 - -
Tsu05g00859 462 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 1 458 - -
Tsu05g00859 462 PANTHER SPARTIN 1 458 IPR045036 -
Tsu05g00859 462 Pfam Senescence domain 259 446 IPR009686 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00859 Tsu-Chr5 7438762 7443721 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00859 K19366 - gmx:100804971 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00859 05 7438762 7443721 Tsu05g00859 05 7438762 7443721 ECH
Tsu05g00859 05 7438762 7443721 Tsu04g03533 04 44514041 44525122 PCT