Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00856 ATGGCTGTTTGGGCGAACATGTTACCTTATTGTATGGCGTTTCTTCTTCTACTTTTTTTCATGTGTAGATCAGGAGCAAAGGTTGTCACAATTGATGTGCGAGCAGCCAAAAATCTAATCGAGACCGATCACATTTATCTTGATGTTAGGACGGTGGAAGAGTTTGCGAAAGGGCATGTAGATGCCGCTAAGATCATTAACATTCCATACATGATGGATACACCCAAAGGCAGGGTGAAGAATACAGATTTTCTAAAGGAGGTTTCATCTATTTGCAATAAAGAAGATCAGCTAGTTGTGGGTTGCCAAAGTGGGGTTCGATCTCTGTATGCAACTTCTGATCTTCTATCCGATGGTTTTATGAATGTGAAGGACATGGGAGGAGGTTATGTGGACTGGGTTAGAAACAAGTTTCCAATTAATACATCAGTAGCCAAAGAAGAACtataa 450 0.4044 MAVWANMLPYCMAFLLLLFFMCRSGAKVVTIDVRAAKNLIETDHIYLDVRTVEEFAKGHVDAAKIINIPYMMDTPKGRVKNTDFLKEVSSICNKEDQLVVGCQSGVRSLYATSDLLSDGFMNVKDMGGGYVDWVRNKFPINTSVAKEEL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00856 149 Pfam Rhodanese-like domain 36 135 IPR001763 -
Tsu05g00856 149 ProSiteProfiles Rhodanese domain profile. 40 142 IPR001763 -
Tsu05g00856 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 14 148 IPR044684 GO:0003824
Tsu05g00856 149 Gene3D - 19 141 IPR036873 -
Tsu05g00856 149 CDD RHOD 35 134 - -
Tsu05g00856 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 14 148 - -
Tsu05g00856 149 SMART rhod_4 30 139 IPR001763 -
Tsu05g00856 149 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 27 140 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00856 Tsu-Chr5 7424001 7425117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00856 27 142 Sulfurtransferasese or Rhodanese AT5G66170 56.897 1.77e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00856 - K15692 gmx:100803436 230.335