Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00855 ATGGCTATTTCAGTGAATTTGTTACCTTGTTGTTTGGTTCTTCTTCACTTTGTCATGTGTAGCTTAGGAGCAAAGGTTGTGACTATTGATGTACAAGAAGCTAAGAATCTCATCCAAACTGGTCACATTTATCTTGATGTTAGGACGGTGCAAGAGTTTGTGAAAGGACCTCGTGTGAATACATCTAAGATAATTAATATTCCATACATGTTGGATACACCCAAGGGCAAGGTCAAGAACCTATATTTTCTAAAGGAGTGTTCATCTCTTTGTAACAAAGAAGATAATCTCGTTGTGGGTTGTCAATCTGGATTGAGGTCTCTGCATGCAACTTCTGATCTTCTAGATGGTGGTTTTAAGAATGTGAAGAACATGGATGGAGGTTATGCAGAATGGGTTAGAAACATGTTTCCAATAACTAATTGCAGTGATGGATCTTGTTGA 444 0.3784 MAISVNLLPCCLVLLHFVMCSLGAKVVTIDVQEAKNLIQTGHIYLDVRTVQEFVKGPRVNTSKIINIPYMLDTPKGKVKNLYFLKECSSLCNKEDNLVVGCQSGLRSLHATSDLLDGGFKNVKNMDGGYAEWVRNMFPITNCSDGSC 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00855 147 SMART rhod_4 29 138 IPR001763 -
Tsu05g00855 147 ProSiteProfiles Rhodanese domain profile. 38 141 IPR001763 -
Tsu05g00855 147 PANTHER THIOSULFATE SULFURTRANSFERASE 18 5 141 IPR044684 GO:0003824
Tsu05g00855 147 Gene3D - 19 140 IPR036873 -
Tsu05g00855 147 CDD RHOD 33 133 - -
Tsu05g00855 147 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 25 140 IPR036873 -
Tsu05g00855 147 Pfam Rhodanese-like domain 31 134 IPR001763 -
Tsu05g00855 147 PANTHER THIOSULFATE SULFURTRANSFERASE 18 5 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00855 Tsu-Chr5 7421252 7422641 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00855 25 139 Sulfurtransferasese or Rhodanese AT5G66170 55.652 1.38e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00855 - K15692 gmx:100815122 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00855 05 7421252 7422641 Tsu05g00855 05 7421252 7422641 ECH