Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00853 ATGTTATTATTCCCTAATAATATTATAGGTGAAAAATGGCTAGGATTTGTAACAGCCATATGGGTTCAAGCAATATGTGGAAACAATTATACATTTGCAAATTATTCTGATGTGTTAAAGTCTCTAATGGCTTTGACTCAAATGCAACTTAATAATCTTTCTGTTGCTAAAGATGTTGGTAAAgcttttggtattttatcaGGTCTTGTTTCTGATCGTTGGCCAACTTCAGTTATTCTTATGATTGGTGCTGTTTTGGGTTTCATTGGCTATGGTGTTCAATGGCTTGTTGTTAGCCAAAGAATAGCTCCACTTCCTTATTGGATGATGTGTATATTCTTATGTATGGGAGGAAACAGCTCAACATGGATGAACACAGCAGTACTTGTAACTTGCAtgagaaacttttcaaaaaACCGCGGTCCAATTTCCGGAATTCTAAAAGGTTATGTAGGACTCAGTACAGCAATATTCACTGATATATGCACAGCTTTGTTTTCTTCAGACCCATCAAAATTCCTATTAATGCTCACAATTGTTCCTGCTGTCATTTGTTTCATTGCTGCTATTTTCCTTCATGAAACTCCACCAGCTTCAACTTCAACAGAAGAaaaccaagagacaaaattctTCAATGTGTTTAACTTGATTGCAGTTACGGTCGCAGTTTATCTCTTGGCATTTGATATAACTGGACCtcataaacatgttatttcAATGATTTTCACATTAGGACTTTTGATCCTATTAGCTATGCCACTTCTTGTTCCTTTATATTTAGCTATCTTCAAAACTAGTCCTAGTATTGACAAAGAAAAACAGATTCATGAACCATTGTTAGCAGAAAAgattgaaaaggaaaaggaaaaggaaaaggaagagaTATGTAACAAGGTGGAGGAAGATGAGGTTAAGCGAAAACCGGTGTTAGGGGAAGAACATACTATCACTGAAATGGTGAAAACTgttgatttttgggttttgtttgTGTCATTTCTATGTGGAGTGGGAACAGGACTATGTGTTATGAATAACATGGGACAAATGGGATTAGCACTTGGTTACCGCGATGTTTCGTTGTTCATTTCATTCATTAGCATTTGGGGTTTCTTTGGACGGATTCTTTCTGGATCACTCTCGGAATACTATATCAGAAAATCAGGCATGCCAAGGCTAGTATGGAATGCAGCTTCTCAAATTCTGATGTTTTTCGGTTACATTGCATTAGCTATGGCCTTACCAGGATCACTCTACATTGGATCAATGTTAGTAGGAATATGCTACGGAGTTCGTCTTACGATAACACCAGCAGCAGCTTCAGAACTATTTGGTCTCAAATACTATGGTTTATTATACAACATTCTCATTCTCAATCTTCCAATTGGTTCATTCATATTTTCTGGTCTCATTGCTGGTTATCTTTATGATATTGAAGCCACTAGTGTTCCAGGAGGTGGAAACACTTGCATTGGAGCACATTGTTTCATGCTTGTTTATGTGATTATGGCTTTTGCTTGTGTATTGGGGTGTGGATTGGATTTGTTACTTGCAGTTAGAACAAAGAAGTTATATTCCAAGATACATGTAGAGAGAAATCTTGTGGATTCCCAAGTTCAACATTGA 1623 0.3426 MLLFPNNIIGEKWLGFVTAIWVQAICGNNYTFANYSDVLKSLMALTQMQLNNLSVAKDVGKAFGILSGLVSDRWPTSVILMIGAVLGFIGYGVQWLVVSQRIAPLPYWMMCIFLCMGGNSSTWMNTAVLVTCMRNFSKNRGPISGILKGYVGLSTAIFTDICTALFSSDPSKFLLMLTIVPAVICFIAAIFLHETPPASTSTEENQETKFFNVFNLIAVTVAVYLLAFDITGPHKHVISMIFTLGLLILLAMPLLVPLYLAIFKTSPSIDKEKQIHEPLLAEKIEKEKEKEKEEICNKVEEDEVKRKPVLGEEHTITEMVKTVDFWVLFVSFLCGVGTGLCVMNNMGQMGLALGYRDVSLFISFISIWGFFGRILSGSLSEYYIRKSGMPRLVWNAASQILMFFGYIALAMALPGSLYIGSMLVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSFIFSGLIAGYLYDIEATSVPGGGNTCIGAHCFMLVYVIMAFACVLGCGLDLLLAVRTKKLYSKIHVERNLVDSQVQH 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00853 540 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 534 - -
Tsu05g00853 540 SUPERFAMILY MFS general substrate transporter 29 522 IPR036259 -
Tsu05g00853 540 CDD MFS_Mch1p_like 12 510 - -
Tsu05g00853 540 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 4 534 - -
Tsu05g00853 540 Gene3D MFS general substrate transporter like domains 13 510 IPR036259 -
Tsu05g00853 540 Pfam Nodulin-like 12 258 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00853 Tsu-Chr5 7408693 7411479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00853 12 536 Nodulin-like Gene Family AT4G34950 63.620 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00853 - - cit:102624072 742.265