Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu05g00840 | atgatTTCCTCCGTATCTCTTCCTTCCGTTTCTCTCTACGCAACTAACTTCTCCGGCAACACCGTAACACCACCACCGTGCCGTATCAGATCTAAACCTTTTGTAATCTCCGCTAGCGCTACAGCCACCGCTGAACCTCGCTCTACATCATGGActgatcaacaacaacaacaaagaccTTCTTATCTAAACATGAACACAAACTCGATCTGTTCTCCTTCATCACTTTACGAGATCCTTGGTATATCAGCAGGTGCATCGGTTCAAGAAATTAAATCTGCTTACCGACGACTTGCGAGAGTTTGTCATCCCGATGTGGCAGCGATTGACCGGAAAAATTCTTCGGCGGATGATTTTATGAAGATTCATTCTGCTTATTCTACTCTTTCGGATCCAGAAAAACGTGCTAATTATGATCGGAGTCTTTTTCGTCGACAACAACGACCGTTGTCGACGATGATGTCTTCGGGTTACTCTAGCCGGAAATGGGAAACTGATCAGTGTTGGTAG | 510 | 0.4275 | MISSVSLPSVSLYATNFSGNTVTPPPCRIRSKPFVISASATATAEPRSTSWTDQQQQQRPSYLNMNTNSICSPSSLYEILGISAGASVQEIKSAYRRLARVCHPDVAAIDRKNSSADDFMKIHSAYSTLSDPEKRANYDRSLFRRQQRPLSTMMSSGYSSRKWETDQCW | 169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu05g00840 | 169 | SMART | dnaj_3 | 74 | 134 | IPR001623 | - | |
Tsu05g00840 | 169 | PRINTS | DnaJ domain signature | 77 | 95 | IPR001623 | - | |
Tsu05g00840 | 169 | PRINTS | DnaJ domain signature | 95 | 110 | IPR001623 | - | |
Tsu05g00840 | 169 | PRINTS | DnaJ domain signature | 114 | 134 | IPR001623 | - | |
Tsu05g00840 | 169 | PANTHER | DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED | 1 | 169 | - | - | |
Tsu05g00840 | 169 | Gene3D | DnaJ domain | 61 | 163 | IPR036869 | - | |
Tsu05g00840 | 169 | PANTHER | - | 1 | 169 | - | - | |
Tsu05g00840 | 169 | ProSiteProfiles | dnaJ domain profile. | 75 | 142 | IPR001623 | - | |
Tsu05g00840 | 169 | CDD | DnaJ | 77 | 131 | IPR001623 | - | |
Tsu05g00840 | 169 | ProSitePatterns | Nt-dnaJ domain signature. | 119 | 138 | IPR018253 | - | |
Tsu05g00840 | 169 | Pfam | DnaJ domain | 76 | 139 | IPR001623 | - | |
Tsu05g00840 | 169 | SUPERFAMILY | Chaperone J-domain | 44 | 138 | IPR036869 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu05g00840 | Tsu-Chr5 | 7202677 | 7203869 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu05g00840 | 65 | 139 | C2H2 Transcription Factor Family | AT1G74250 | 41.772 | 5.33e-09 | 52.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu05g00840 | - | - | gmx:100800959 | 221.861 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu05g00840 | 05 | 7202677 | 7203869 | Tsu05g00840 | 05 | 7202677 | 7203869 | ECH | |
Tsu05g00840 | 05 | 7202677 | 7203869 | Tsu04g03516 | 04 | 44303077 | 44303900 | ECH |