Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00815 ATGGAGTCCATGGAGTCATGTGTCCCACCAGGCTTTCGCTTCCATCCAACCGATGAAGAACTTGTTGGTTATTATCTCAGAAAGAAAATCGCTTCTCAGAAAATCGATCTTGATGTTATCAGAGAGATCGATCTTTATCGTATCGAACCATGGGATCTTCAAgAGAGGTGCAGGATTGGATATGAAGAGCAGAATGAGTGGTATTTTTTTAGTCACAAAGATAAAAAGTATCCAACTGGAACAAGAACTAATAGAGCTACCATGGCTGGATTTTGGAAAGCTACAGGAAGAGATAAAGCAGTTTATGACAAAATGAAACTAATTGGGATGAGGAAGACTCTTGTTTTCTATAAAGGAAGAGCACCTAATGGACAAAAATCTGATTGGATCATGCATGAGTATCGACTTGAATCCGATGAAAATGGACCTCCACAGGAAGAAGGATGGGTTGTTTGTAGAGCATTTAAGAAAAGAACAACAAATAGCCAAAATACAAAAAGAACAATTGAAGGATGGGACACTAGCTACTTCTATGAAGAAGCTCCAAGTGGAATCATCAACAATTCCATGGTTGATCCAATTGAGTTAATCTCAAGACAACCTCAAAGCTATATATCTCAAACTTACAATATGTGTAAGCAAGAGATAGAAGCATGCATGCATGCAGAACAATTTGTACAGCTTCCTCAACTTGAAAGTCCTTCATTGCCATTACTAGTAAAGAGGCCAAGCACGGTGTCTCTAGTATCATCCGAAATTAATAACGATGACACTGATGACCAAAAtcggttattattattatccaacaataataataataatactactacTATAACTACGAATAATGTGACCGATTGGAGAGCTCTTGATAAATTTGTGGCTTCTCAACTAAGTCATGAAGTTGAAACTGATCAAGGAGTATTGTTGTCAAGTTTTGGTGCAACAAATAATAATCATAGCTCGGATATGGCATTGATGTTACTGCAGCAAAGTAGTAGGGATGAAGGGAACAAGTTAAGTCCTTTTTTGAATGGAAGTTCAGATTGCAGTGATATTGGGATATGCATATttgaaaaatga 1080 0.3593 MESMESCVPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKMKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKRTTNSQNTKRTIEGWDTSYFYEEAPSGIINNSMVDPIELISRQPQSYISQTYNMCKQEIEACMHAEQFVQLPQLESPSLPLLVKRPSTVSLVSSEINNDDTDDQNRLLLLSNNNNNNTTTITTNNVTDWRALDKFVASQLSHEVETDQGVLLSSFGATNNNHSSDMALMLLQQSSRDEGNKLSPFLNGSSDCSDIGICIFEK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00815 359 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 337 - -
Tsu05g00815 359 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Tsu05g00815 359 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Tsu05g00815 359 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
Tsu05g00815 359 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Tsu05g00815 359 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00815 Tsu-Chr5 6974084 6976996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00815 1 358 NAC Transcription Factor Family AT2G18060 61.518 3.06e-152 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu05g00815 NAM 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00815 - - aprc:113869508 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00815 05 6974084 6976996 Tsu05g00815 05 6974084 6976996 ECH
Tsu05g00815 05 6974084 6976996 Tsu04g03490 04 44083735 44088825 PCT