Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00806 ATGCTATACACCTATAATGATGCAATTAATGGATTCTCAACAAGTTTGACAGTTGAAGAACTTCAGTCACTAAAGAGCCAAGTTGGGGTTCTAAAGGTGACAACAGATGAAATGTATAAAATCTTCACAACTCGAACACCTGAGTTCCTTGGGCTCGATAAAATTGCTAGTACACTCCCCACAACAAACAAAAGTATTGACATAATTGTGGGACTCATCGATACAGGTGTATGGCCTGAAAGCAAGAGCTTCGATGATACCGGATACAAGTCAATCCCCCACACATGGAAAGGAAAATGTGAAATAGGTATCAATTTCACGACCTCAAATTGTAATAAGAAATTGATTGGTGCGAGGTTCTTTCTAAAGGGGTATGAGGCATCTGAGGGTCCGATTAACGAAACCATCGAGTCTAGGTCACCTCGAGATGATGATGGCCATGGAACCCACACGGCGAGCACAGCCGCAGGATCTCCAGTAGGGAATGCAAATTTTTTCGGCTACACCAATGGGACAGCACGTGGGATGGCTGTTGGCGCTAGAGTTGCTGTCTATAAGGCTTGTTGGCAAAATGGATGCACGGGTTCTGATGTATTGGCTGCAATGGATCAAGCAATTGTAGACAACGTCAATGTTCTTTCATTGTCTTTTGGTTATTGGCCAATTCCATACTTTTATGATGAAATTGCAATTGGATCTTTTGCAGCAATGGAGCATGGGATTCTAGTTTCAAGTGCTGCAGGAAACAATGATAAAGTACATCGCTCTGTGACAAATGTAGCACCTTGGATTACAACTATGGGTTCTGGCACACTCGATCGAGATTTTCCTGCATATGTCAGAAATGTAAGCAATGATGGAATAAAAGGTCTCGGTACATGTCTTCCAGATAGCTTAGATCCAAAGAAGGTATCTGGAAAGATTGTGTTGTGTGATCGCGGAGAGAATTCTAGAATTGAGAAAGGAAATATAGTAAAATCTGCTGGTGGTTTGGGTATGGTGTTAGCCAACACTGATCAATTTAGAGAAGCCACAGTGGCAGATGCCCACTTTATGCCAGCAATTAATGTGGGCTTCAAAGATGGTGaagcaataaaaaaatacatattttcgGATCCAAAACCAATGGGCACAATTGTGTTTCAAGGAACAAGAATTGGGGTTGAGCCATCACATGTTGTTGCACAAACAAGCTTACGAGGCCCCAATATTACTACCCCACAAATATTGAAGCCTGATTTAATTGCACCAGGTGTTAACATCTTAGCAGCATATACAAGGAATCTAAGTCCCATAGGGGAGGATTCTGATCCTAGGCGCGTAGATTTCAACATTATGACAGGAACATCAATGGCATGCCCTCATGTAAGTGGATTAGCAGCTTTGATCAAGTCAGTTCATCCAGAATGGAATCCAGCTGCCATTCGATCTGCATTAATGACAACAGCCTATACAACTTACAAGAACAATCAAACATTATTGGATGGTGCAACCAAAAATCCAGCAACTCCATTTGATTTTGGTGCTAGGCACGTCGACCCTATTTCCGCACTAAATCCTGGACTAGTCTATGATTTGACAGTGGATGACTATTTGAGCTTCCTATGTGCACTGAACTACTCGACTACTAATATTGAAATCGTGGCGAGGAGAAAGTACGCATGTGACCCAAAGAAACAATACAGTGTTACAAACCTTAATTACCCTTCTTTTGTTGTGGTCTTTCAGAGCGGGCATAGTGTAGAAGAGATTAATTATATTCGGATTCTTACTAATGTGGGTGTCGCTAGAACATACAAGGTATCAGCAAAGTTAGATGATCCATCTGTCAAGGTCTCAATTAAACCAGAAGTGTTAAGTTTTAagacaaatgagaaaaaattaTACACAGTTACATTTACTACATCTGGTTCGAAACCAAATAACACTAGAAGTTTTGGAAGATTGGAATGGTCTGATGGAAAAAATGTTGTTAGAAGTCCTATAGCGTTTATTTGGAAATTGCCGTGA 2010 0.403 MLYTYNDAINGFSTSLTVEELQSLKSQVGVLKVTTDEMYKIFTTRTPEFLGLDKIASTLPTTNKSIDIIVGLIDTGVWPESKSFDDTGYKSIPHTWKGKCEIGINFTTSNCNKKLIGARFFLKGYEASEGPINETIESRSPRDDDGHGTHTASTAAGSPVGNANFFGYTNGTARGMAVGARVAVYKACWQNGCTGSDVLAAMDQAIVDNVNVLSLSFGYWPIPYFYDEIAIGSFAAMEHGILVSSAAGNNDKVHRSVTNVAPWITTMGSGTLDRDFPAYVRNVSNDGIKGLGTCLPDSLDPKKVSGKIVLCDRGENSRIEKGNIVKSAGGLGMVLANTDQFREATVADAHFMPAINVGFKDGEAIKKYIFSDPKPMGTIVFQGTRIGVEPSHVVAQTSLRGPNITTPQILKPDLIAPGVNILAAYTRNLSPIGEDSDPRRVDFNIMTGTSMACPHVSGLAALIKSVHPEWNPAAIRSALMTTAYTTYKNNQTLLDGATKNPATPFDFGARHVDPISALNPGLVYDLTVDDYLSFLCALNYSTTNIEIVARRKYACDPKKQYSVTNLNYPSFVVVFQSGHSVEEINYIRILTNVGVARTYKVSAKLDDPSVKVSIKPEVLSFKTNEKKLYTVTFTTSGSKPNNTRSFGRLEWSDGKNVVRSPIAFIWKLP 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00806 669 ProSitePatterns Serine proteases, subtilase family, serine active site. 448 458 IPR023828 -
Tsu05g00806 669 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 289 666 - -
Tsu05g00806 669 Pfam Fibronectin type-III domain 565 663 IPR041469 -
Tsu05g00806 669 Gene3D - 535 665 - -
Tsu05g00806 669 Pfam Peptidase inhibitor I9 1 41 IPR010259 -
Tsu05g00806 669 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 289 666 IPR045051 -
Tsu05g00806 669 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 281 IPR045051 -
Tsu05g00806 669 Gene3D Peptidase S8/S53 domain 376 534 IPR036852 GO:0004252|GO:0006508
Tsu05g00806 669 Gene3D Peptidase S8/S53 domain 67 272 IPR036852 GO:0004252|GO:0006508
Tsu05g00806 669 ProSiteProfiles Serine proteases, subtilase domain profile. 49 518 - -
Tsu05g00806 669 SUPERFAMILY Subtilisin-like 57 525 IPR036852 GO:0004252|GO:0006508
Tsu05g00806 669 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 1 281 - -
Tsu05g00806 669 MobiDBLite consensus disorder prediction 132 156 - -
Tsu05g00806 669 CDD Peptidases_S8_3 39 484 IPR034197 -
Tsu05g00806 669 PRINTS Subtilisin serine protease family (S8) signature 447 463 IPR015500 -
Tsu05g00806 669 PRINTS Subtilisin serine protease family (S8) signature 65 84 IPR015500 -
Tsu05g00806 669 PRINTS Subtilisin serine protease family (S8) signature 143 156 IPR015500 -
Tsu05g00806 669 Pfam PA domain 300 365 IPR003137 -
Tsu05g00806 669 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Tsu05g00806 669 CDD PA_subtilisin_like 280 379 - -
Tsu05g00806 669 Gene3D - 289 375 - -
Tsu05g00806 669 Pfam Subtilase family 67 490 IPR000209 GO:0006508|GO:0008236
Tsu05g00806 669 Gene3D - 273 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00806 Tsu-Chr5 6860383 6862480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00806 1 666 Subtilisin-like Serine Gene Family AT5G67360 57.963 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00806 - - gmx:100815413 832.402