Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00801 ATGGATTCACTTCTAAAATTGCCAATCATAGATAACTTTAAAGAAGAACCATTCTTTATGGCAATCATGTTCATCGTACCACTAATACTTCTTTTGGGTTTAGTGTCACTAATCCTCAAAAAGCCAAAATATCCACCTGGACCAAAAGGGTTACCTTTTATTGGTAACATGCTAATGATGGACCAATTAACCCACCGTGGTTTAGCCAACCTAGCAAAACAATACGGTGGCATATTTCACCTACGCATGGGGTTCCTCCACATGGTAGCTATATCCGATGCGGTTGCGGCACGTCAAGTTCTCCAAGTTCAAGACAACATTTTTTCCAACCGACCGGCGACCCTAGCCATAAAATACTTAACTTACGACCGTGCTGACATGGCATTTGCTCACTATGGACCCTTCTGGCGCCAGATGCGAAAACTTTGTGTCATGAAACTCTTCAGCCGCAAGCACGCAGAGTCCTGGCAATCAGTTAGAGACGAGGTTGACTATGCTGTCAGAACTGTATCAGACAACATAGGCAACCCTGTGAACATTGGAGAGCTCGTGTTCAACTTAACCAAAAATATTATCTATCGAGCGGCTTTTGGGTCGAGCTCGAGAGAAGGACAAGATGAGTTTATTGGAATATTGCAAGAGTTTTCCAAATTGTTTGGAGCTTTTAATATTTCTGACTTTGTACCTTGTTTTGGAGCTATTGACCCACAAGGGCTTAATGCTAGGCTTGTTAAGGCTCGTAAAGCATTGGATTGTTTCATAGACAAAATCATAGATGAACACATGCAGAAAAAGAAGGATGTTGGTGATGAAGAAACGGATATGGTGGATGAATTGCTTGCTTTCTATAGTGAGGAGGCTAAATTGAATAATGAATCGGACGATTTGCAAAATTCCATCAAACTTACCAAGGATAACATCAAAGCTATCATCATGGATGTGATGTTTGGAGGAACAGAAACCGTAGCCTCGGCAATTGAGTGGGCCATGGCTGAGCTTATGAAAAGTCCAGAAGATCTAAAAAAGGTCCAACAAGAGTTAGATGAAGTTGTGGGACTGACCCGTCGAGTCGAAGAGCCTGATTTCGAGAAATTGACTTATCTAAAATGTGTTCTTAAAGAAACTCTACGACTACACCCACCAATTCCGTTGCTTCTCCACGAAACTGCAGAGGATGCTACCGTTAACGGTTATTTTATTCCAAAGCGCGCACGTGTAATGATAAATACATGGGCGATTGGGAGAGATAAGAACTGTTGGGAGGAACCCGAGAATTTTAAGCCTTCACGGTTTTTGAAACCAGGTGTGCCTGATTTTAAAGGGAGTAATTTTGAGTTTATTCCGTTTGGGTCGGGTCGTAGATCTTGTCCTGGAATGCAACTTGGTTTGTATGCGCTTGATTTGGCGGTGGTTCATTTGCTTCATTGTTTTACTTGGGAGTTGCCGGATGGAATGAAACCAAGTGAAATGGATATGAGTGATGTGTTTGGACTCACCGCTCCTAGAGCGAGTCGACTTGTTGCTATTCCTACTAAGCGTGTTTTGTGTCCTCTGGACTAG 1560 0.425 MDSLLKLPIIDNFKEEPFFMAIMFIVPLILLLGLVSLILKKPKYPPGPKGLPFIGNMLMMDQLTHRGLANLAKQYGGIFHLRMGFLHMVAISDAVAARQVLQVQDNIFSNRPATLAIKYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKHAESWQSVRDEVDYAVRTVSDNIGNPVNIGELVFNLTKNIIYRAAFGSSSREGQDEFIGILQEFSKLFGAFNISDFVPCFGAIDPQGLNARLVKARKALDCFIDKIIDEHMQKKKDVGDEETDMVDELLAFYSEEAKLNNESDDLQNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKKVQQELDEVVGLTRRVEEPDFEKLTYLKCVLKETLRLHPPIPLLLHETAEDATVNGYFIPKRARVMINTWAIGRDKNCWEEPENFKPSRFLKPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVVHLLHCFTWELPDGMKPSEMDMSDVFGLTAPRASRLVAIPTKRVLCPLD 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00801 519 Gene3D Cytochrome P450 39 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PANTHER CYTOCHROME P450 84A1-RELATED 17 519 - -
Tsu05g00801 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 17 519 - -
Tsu05g00801 519 Pfam Cytochrome P450 45 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Tsu05g00801 519 SUPERFAMILY Cytochrome P450 45 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 Coils Coil 286 306 - -
Tsu05g00801 519 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00801 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00801 Tsu-Chr5 6811391 6815180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00801 52 518 Monolignol Biosynthesis Gene Families AT4G36220 76.956 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00801 K09755 - gmx:100783430 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00801 05 6811391 6815180 Tsu04g03480 04 43980333 43985024 ECH
Tsu05g00801 05 6811391 6815180 Tsu05g00801 05 6811391 6815180 ECH
Tsu05g00801 05 6811391 6815180 Tsu04g03480 04 43980333 43985024 PCT