Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00789 ATGGAATATTGGTTTATAGGTGTATGTGTGAGCATAATTGTTTTGTTAATAAGTTttgtgatgaagaagaagaagaagaagaaggagaaaaatggaaataaaataccAAAAGGGAATTCAGGTTGGCCCTTACTTGGAGAGACACTTGAGTTCATTGCTTCTGGCTATTCTTCTCAACCTGTCATCTTCATGGAAAATCGCAAGTCTATTTATGGGAGTGTGTTTAAGACAAATATATTGGGAAGCAATGTGATAATTTCAACAGATCCAGAAGTAAACAAGGTTATTCTGCAGAATCAAAGGAACATTTTCGTCCCGGCTTATCCAAAATCAATTAGAGAATTAATGGGAGAACACTCAATACTTCAATTGAATGGTAACATGCATAAGAAACTGCATTCACTCATTGCAGTGTTTCTTAAATCTCCACAGTTTAAAGCTCAAATCACCACAGATATTCAATATTCTGTCAAACAATGCTTAGCTTCTTGGACCAACAAAACAATATACTTTCAAGATGAAGTCAAAAAGATTACATTTACTATTTTGATTAAAGTTTTGATGAGCATTGGTCCTGGTGAAGATTTGGATTTGTTGAAAAGAGAATTTGGAGAATACATCAAAGGCTTGATTTGCTTACCCATCAAGTTTCCAGGAACAACACTATACAAATCCTTAAAGGCTAAGGAAAGGATGATGAAAATGGTGAGGAGGATAGTAAAGGAGAGAATGAAGCAAATTAATGATAATAATGCAGAAGATCATTGTGCAGTGAATGATGTGGTGGATGCATTGTTAAGGGATAAGAGTGAGTTATACAACTCTAGCTCAAGTTCAAGCCTAATGGTGGAAATGATTAGCCAAAACATCATAGAGTTTATGATCCCAGGGGAAGAGACCCTTCCTACAGCCATGACATTGGCCCTCAAATTTCTCTCTGATTCTCCTCTCGCTCTATCGAAACTTAAGGAGGAAAACATGgaattgaagaagcagaagACTAATTGCTCAGATGATTATACATGGACTGACTACATGTCACTGCCATTTACTCAAAATGTCATCAGTGAAACTCTTAGAATGGCCAATATAGTCAATGGCATTTGGAGAAAAGCAGTCAAAGACGTCGAAATTAAAGGGTACCTAATTCCAAAAGACTGGTGTGTTATGGCATCTCTTACCTCCGTTCATATGGACGAAAAAAACTACGAAAACCCTTTTAAGTTTGACCCATGGAGATGGGAGAAAATTGGAGTTGTGGCTAGTAACAACTGTTTTACCCCATTTGGGAGTGGACATAGACTATGTCCTGGTTTAGAACTTTCTAGGCTAGAACTCTCCATTTTCCTTCACCATCTTGTTACTACATACAGATGGGTGGCTGAGAGAGATGAAATAGTATATTTTCCAACTGTTAAGATGAAGAAAAAGCTCCCAATTAGGGTGCAACCCATTAACACTTGA 1464 0.3545 MEYWFIGVCVSIIVLLISFVMKKKKKKKEKNGNKIPKGNSGWPLLGETLEFIASGYSSQPVIFMENRKSIYGSVFKTNILGSNVIISTDPEVNKVILQNQRNIFVPAYPKSIRELMGEHSILQLNGNMHKKLHSLIAVFLKSPQFKAQITTDIQYSVKQCLASWTNKTIYFQDEVKKITFTILIKVLMSIGPGEDLDLLKREFGEYIKGLICLPIKFPGTTLYKSLKAKERMMKMVRRIVKERMKQINDNNAEDHCAVNDVVDALLRDKSELYNSSSSSSLMVEMISQNIIEFMIPGEETLPTAMTLALKFLSDSPLALSKLKEENMELKKQKTNCSDDYTWTDYMSLPFTQNVISETLRMANIVNGIWRKAVKDVEIKGYLIPKDWCVMASLTSVHMDEKNYENPFKFDPWRWEKIGVVASNNCFTPFGSGHRLCPGLELSRLELSIFLHHLVTTYRWVAERDEIVYFPTVKMKKKLPIRVQPINT 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00789 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Tsu05g00789 487 SUPERFAMILY Cytochrome P450 34 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00789 487 PANTHER CYTOCHROME P450 26 8 482 - -
Tsu05g00789 487 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00789 487 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00789 487 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00789 487 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00789 487 Coils Coil 319 339 - -
Tsu05g00789 487 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 8 482 - -
Tsu05g00789 487 PRINTS E-class P450 group IV signature 348 364 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00789 487 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00789 487 PRINTS E-class P450 group IV signature 62 85 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00789 487 PRINTS E-class P450 group IV signature 397 415 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00789 487 PRINTS E-class P450 group IV signature 420 436 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00789 487 Pfam Cytochrome P450 36 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00789 487 Gene3D Cytochrome P450 23 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00789 Tsu-Chr5 6667770 6672002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00789 29 458 Cytochrome P450 AT3G13730 50.348 3.37e-161 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00789 K12637 - gmx:100799030 761.911