Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00788 ATGGAATATTGGATTATAGGTGTATGTGTGGGAATAATTGTGATGTTAATGAGTTGGTGGTGGATTGTGAAGAAAGAGAGTAATATTACAGTGAGAAAAGGAATTACAATACCAAAAGGAAACTCAGGTTGGCCTTTACTTGGAGAGACTCTTGAGTTCATTGCTTCTGGCTATTCTTCTCATCCTGTCACCTTCTTTGAAAACCGCAAGTCTATTTACGGGAATGtgtttaaatcaaatattctaGGAAGCAATATAATAGTGTCAACAGACTCAGAGGTGAACAAGGTCATTCTGCAGAATCAAGGGAACACATTTGTCCCTGCTTATCCAAAATCAATCAGACAATTAATGGGAGAACACTCTATACTTGAATTGAATGGAAACATGCATAAGAAATTGCATTCACTCATTTTAGTGTTTCTTAAATCCCCACAATTTAAAGCTAAAATCACTAGAGATGTTGAACACACTGTCAAACAATGCTTAGCATCTTGGAATCACAAAACAATTTATGTTCAAGATGAAGTCAAAAAGATTACATTTACTATTTTGATTAAAGTTTTGATGAGTGTTGGTCCTGGTAAAGATCTGGACTTGTTGAGAACAGAATTTGGAGAATTCATCAAAGGCTTGATTTGCTTGCCCATCAAGTTTCCAGGAACAAGGCTATACAAATCTTTGAAGGCAAAGGAAAGGATGATGAAGATAGTGAGGAGGATAGTGGATGAGAGAAAGAAACTAATGATGGATAATAATGCAGAAGATNATAATGCAGAAGATCAATGTATACTAGATGCACTCTTAAGGGATAAGGGTGAGTTCTCTAGCTCAAACCCAAGCTCAAACTTGGCATTGGAAAGGATTTGCCAAAACATCATAGTGATGATGATCCCAGGGGAAGAGACCCTTGCTACGGCCATGACCTTGGCCCTCAAATTCCTCTCTGAAACCCCTCTTGTTCTGACCAAACTTATGgAGGAGCACATGGAATTGAAGAAGCTGAAGACTGATTGCTCAAATGATTATACATGGACTGACTACATGGCACTGCCGTTTACTCAAAATGTCATCAGTGAAACTCTTAGAATGGCCCATGTAGTCAATGGCATTTGGAGGAAAGCACTCAAAGACGTTGAAATTAAAGGTGGGTACCTAATTCCAAAGGGCTGGTGTGTTATGGCATCTCTTACTTCTGTTCACTTGGACCCAAACAACTATGAAAACCCTTTCAAGTTTGATCCATGGAGATGGGAGAAAATTGAAGCTGTGGCTAGTAACATCTGCTTTACCCCATTTGGTGGTGGACATAGATTATGTCCTGGGTTAGAACTTTCTAGGGTAGAGCTCTCTATTTTCCTTCACTATCTTGTTACTACATACAGATGGGTCGCTGAGAGGGATGAAATAATCTACTTTCCAATAGTTACGATGAAGAAAAAACTCCCAATTAGAGTGGAACCCATTAACGCTTGA 1476 0.3841 MEYWIIGVCVGIIVMLMSWWWIVKKESNITVRKGITIPKGNSGWPLLGETLEFIASGYSSHPVTFFENRKSIYGNVFKSNILGSNIIVSTDSEVNKVILQNQGNTFVPAYPKSIRQLMGEHSILELNGNMHKKLHSLILVFLKSPQFKAKITRDVEHTVKQCLASWNHKTIYVQDEVKKITFTILIKVLMSVGPGKDLDLLRTEFGEFIKGLICLPIKFPGTRLYKSLKAKERMMKIVRRIVDERKKLMMDNNAEDXNAEDQCILDALLRDKGEFSSSNPSSNLALERICQNIIVMMIPGEETLATAMTLALKFLSETPLVLTKLMEEHMELKKLKTDCSNDYTWTDYMALPFTQNVISETLRMAHVVNGIWRKALKDVEIKGGYLIPKGWCVMASLTSVHLDPNNYENPFKFDPWRWEKIEAVASNICFTPFGGGHRLCPGLELSRVELSIFLHYLVTTYRWVAERDEIIYFPIVTMKKKLPIRVEPINA 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00788 491 Gene3D Cytochrome P450 27 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00788 491 SUPERFAMILY Cytochrome P450 33 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00788 491 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00788 491 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00788 491 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00788 491 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00788 491 PANTHER CYTOCHROME P450 26 7 486 - -
Tsu05g00788 491 Pfam Cytochrome P450 38 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00788 491 PRINTS E-class P450 group IV signature 351 367 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00788 491 PRINTS E-class P450 group IV signature 64 87 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00788 491 PRINTS E-class P450 group IV signature 401 419 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00788 491 PRINTS E-class P450 group IV signature 424 440 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00788 491 PRINTS E-class P450 group IV signature 440 458 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00788 491 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 7 486 - -
Tsu05g00788 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00788 Tsu-Chr5 6657637 6660801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00788 37 386 Cytochrome P450 AT4G36380 59.829 3.38e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00788 K12637 - gmx:100799030 731.48