Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00764 ATGGAGAAGACACGACTAAATAACCTATTTCCTCTAACTCCAAGTTCAACATTCTCAACCAAGAAGGGACGGAGTGGATATGAACCATCAGACACAGAGACTGAGTGGCAAGATACTCCGCGTTATGAACGAGGAGGAAGAAATAACGTGCCTTTGAGTCCCGAAGAAACAAGAGTTAGGAACAAAAGTCCTATGACTCTCCACAAGAGACGTCCTTCAAGGTTTGAATTTGAAGTCCCATCATCACCTTCAGTAACAGGTTCAGTTCTTAGCCAACCAAGAAGAAGACACCACAGCAAGTCGCCCTATAGGCCACGCATAGCACAGGATGATGGTAATAATGATGATGACTCTTTGTCATATATAACAGGTTTGAATTCACATAGAAATACAAGTCCTTTGCCAAGACCCGACTTTGGAAGAACAGTGTCTCCTTATAACCGAACTCATGAACAAAGAACACCTTCAAATGAAAACAGAAAAGCAAGCTCAAGACTTCTGGAAGTGGATAGAGCGAGTACGAAACCAAACTACAGGAGAGCAGTGACTGCTCCAAGATTGAGGGACCAAGAACAAACATTGCAAAACACGAGAATGATGAAACAAAGGGAAAAATCTCCTTTCAAAACAGGTCCAGTTAGAGAACGAGAAATCAATGAAATGATAGCACAGGTGAAGCTATCGAAAAACCCTACTGATGATTATTCATCAGCCCTAGAAAGTACAGACTCAATTCAAACAGGTGATCTTTTCTTTTCACGCGAATGCAATGCCTTGCAAGCGAAGAATTCTTCATTGCCTAAAAAAGTTCAACAATACGGGTATTTTAGCCCAAGACCAGAGATCACCGACATAAATCCCATTAGCAACCCCTCTGAAATTAGGGTTAACCTCAATATGAATATGCCAAGAAACTCATCCGGTAATGTGTTGTTGTCTCAAACAACGAGGGTCACATCAATCAGAAAGGGAAGTGGACCTGGGAAGACTCATACCAATCCTAGTGTAAAAAGTGATGCTAGTGCAAAGACAACTGACAGCATGAGGAAATTCACATCCAACAGAAAAAAGAACCAGAAAGATGCATGGTTTGGTTGTATGATGAGAACAGGAAACTGTAAGATCTCAAGAAAATCACCTGAACGTAAGCCAATTGACGAAGCTTCGTTGATTGAGAGAGCAATAATTGTGGAAAGCATTCCACAGTTCTGGGCAGATAAACATCAACCCGCTTCACTAGATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAACTAGTATCATCACAGGGCTCTTGTCCTCACATTTTGCTTAAAGGACCCTCTAGTTCTGAGAAAAGAGAACTAGCAATGGCTCTTCTTCGAGAAATATATGGTGATGCATGTTCTAATTTATCACATGATTTAAGGCATTTCCCTATTCAGGACAAAAGAACTATGAAAGTATCGGTTCCAATAACGTCCAGTTCTCATCACATGGAGCTCAATGTAAATTCAGAACCAAATGCTAAATATGCTTTGATGGGATTAATCAAAGAAATTAGCAATATATATGCAATTACCCCTGAAGTAAGCACTATGAATTTCAAATCAGATTATAAAGTAATAATTCTTTACGAGGTCGACAAAGCTGTAGAGAATATCCAACACTTGATCAAATGGATCATAGACCGTTATTCAGATATATGCAAATTAGTTCTCTGCTGTGAAGATGATGAAAACATAATTGCATCTGTTAAAAACCGGTTCAAAATTATCAATGTTGATGCTCCTCAAACTCATGAAATTATTGAGGCTCTTACTCAGATAGCAAATAAAGAGGAAATTGATCTATCCATGAATTTTGCTATGAAGATTGCTACAAAATCTAAGCAGAACCTCAGGGAAGCAATCTTGGCTCTTGAAGCATGCAAAGCACACAACTATCCATTTTCAGAAGAACAACCAATTCCTGTTGGATGGGAGAAGATTCTTACTCTCAGTACGAGGGAAATTTCAAATGCTTCTCCTGGATTTTGTCCACCCCAGATTGATTCTCCTGAAACTTGTGGAGCAGCTCCTAAGAAGAACTGGTGCTAG 2088 0.3966 MEKTRLNNLFPLTPSSTFSTKKGRSGYEPSDTETEWQDTPRYERGGRNNVPLSPEETRVRNKSPMTLHKRRPSRFEFEVPSSPSVTGSVLSQPRRRHHSKSPYRPRIAQDDGNNDDDSLSYITGLNSHRNTSPLPRPDFGRTVSPYNRTHEQRTPSNENRKASSRLLEVDRASTKPNYRRAVTAPRLRDQEQTLQNTRMMKQREKSPFKTGPVREREINEMIAQVKLSKNPTDDYSSALESTDSIQTGDLFFSRECNALQAKNSSLPKKVQQYGYFSPRPEITDINPISNPSEIRVNLNMNMPRNSSGNVLLSQTTRVTSIRKGSGPGKTHTNPSVKSDASAKTTDSMRKFTSNRKKNQKDAWFGCMMRTGNCKISRKSPERKPIDEASLIERAIIVESIPQFWADKHQPASLDGFICNKQEAQLLKELVSSQGSCPHILLKGPSSSEKRELAMALLREIYGDACSNLSHDLRHFPIQDKRTMKVSVPITSSSHHMELNVNSEPNAKYALMGLIKEISNIYAITPEVSTMNFKSDYKVIILYEVDKAVENIQHLIKWIIDRYSDICKLVLCCEDDENIIASVKNRFKIINVDAPQTHEIIEALTQIANKEEIDLSMNFAMKIATKSKQNLREAILALEACKAHNYPFSEEQPIPVGWEKILTLSTREISNASPGFCPPQIDSPETCGAAPKKNWC 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00764 695 Gene3D - 596 653 - -
Tsu05g00764 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 640 IPR027417 -
Tsu05g00764 695 MobiDBLite consensus disorder prediction 26 42 - -
Tsu05g00764 695 MobiDBLite consensus disorder prediction 153 167 - -
Tsu05g00764 695 MobiDBLite consensus disorder prediction 8 25 - -
Tsu05g00764 695 PANTHER OS02G0704966 PROTEIN 203 662 - -
Tsu05g00764 695 MobiDBLite consensus disorder prediction 114 133 - -
Tsu05g00764 695 MobiDBLite consensus disorder prediction 319 354 - -
Tsu05g00764 695 MobiDBLite consensus disorder prediction 319 348 - -
Tsu05g00764 695 MobiDBLite consensus disorder prediction 1 167 - -
Tsu05g00764 695 Gene3D - 402 594 IPR027417 -
Tsu05g00764 695 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 203 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00764 Tsu-Chr5 6456647 6460517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00764 403 673 Core DNA Replication Machinery Family AT5G27740 36.727 4.97e-49 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00764 K10756 - gmx:100795321 820.461